Sequence Similarity Clusters for the Entities in PDB 4DA4

Entity #1 | Chains: A,B
DNA (cytosine-5)-methyltransferase 1 protein, length: 873 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 21951
95 % 2 3 12025
90 % 2 3 11831
70 % 2 6 6854
50 % 2 6 6368
40 % 2 6 5946
30 % 2 6 5326
Entity #2 | Chains: C,E
DNA_UPPER_STRAND dna, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: D,F
DNA_LOWER_STRAND dna, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.