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An Information Portal to 105212 Biological Macromolecular Structures

Structure of mouse DNMT1 (731-1602) bound to hemimethylated CpG DNA
Sequence Clustering and Redundancy Reduction Results
4DA4
Sequence Clusters for the Sequence Entities in PDB 4DA4
Entity #1: Chains: A,B - DNA (cytosine-5)-methyltransferase 1 protein, length: 873 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 2 18721
95% 2 3 10321
90% 2 3 10172
70% 2 5 7202
50% 2 5 6597
40% 2 5 6081
30% 2 5 5430
Entity #2: Chains: C,E - DNA_UPPER_STRAND dna, length: 12 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: D,F - DNA_LOWER_STRAND dna, length: 12 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.