Sequence Similarity Clusters for the Entities in PDB 4D8S

Entity #1 | Chains: A
Neuraminidase protein, length: 390 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 8 9613
95 % 7 18 3546 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 11 22 3064
70 % 15 26 2011
50 % 113 153 189
40 % 113 153 207
30 % 129 176 160

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures