Sequence Similarity Clusters for the Entities in PDB 4D8H

Entity #1 | Chains: A
de novo protein protein, length: 132 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 66718
95 % 5 5 14844 Flexibility: Low
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 6 6 12867
70 % 13 16 2642
50 % 13 16 2604
40 % 13 16 2553
30 % 13 16 2417

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures