Sequence Similarity Clusters for the Entities in PDB 4D8H

Entity #1 | Chains: A
de novo protein protein, length: 132 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 64954
95 % 5 5 14450 Flexibility: Low
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 6 6 12531
70 % 13 16 2569
50 % 13 16 2533
40 % 13 16 2484
30 % 13 16 2359

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.