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Crystal structure of HIV-1 NEF Fyn-SH3 R96W variant
Sequence Clustering and Redundancy Reduction Results
4D8D
Sequence Clusters for the Sequence Entities in PDB 4D8D
Entity #1: Chains: A,C - Tyrosine-protein kinase Fyn protein, length: 58 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 39245
95% 8 14 2307
90% 8 14 2337
70% 18 34 977
50% 22 50 628
40% 106 256 108
30% 341 768 10
Entity #2: Chains: B,D - Protein Nef protein, length: 151 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 3 12308
95% 2 5 5091
90% 2 5 5099
70% 6 11 2327
50% 7 13 2047
40% 7 13 2041
30% 7 13 1934
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.