Sequence Similarity Clusters for the Entities in PDB 4D5D

Entity #1 | Chains: A,B
CYMA protein, length: 339 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 7166
95 % 3 5 7736 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.7
PDBFlex
90 % 3 5 7681
70 % 3 5 7473
50 % 3 5 6889
40 % 3 5 6404
30 % 3 5 5726

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures