Sequence Similarity Clusters for the Entities in PDB 4CQN

Entity #1 | Chains: A,D
LEUCINE--TRNA LIGASE protein, length: 880 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 13 2847
95 % 9 13 3172 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 2.1
PDBFlex
90 % 9 13 3225
70 % 9 13 3171
50 % 9 13 3124
40 % 14 21 1901
30 % 15 22 1719
Entity #2 | Chains: B,E
ESCHERICHIA COLI TRNA-LEU UAA ISOACCEPTOR rna, length: 82 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4ARC 1 A LEUCINE--TRNA LIGASE 562 6.1.1.4 | Details
2 4AS1 1 A LEUCINE--TRNA LIGASE 562 6.1.1.4 | Details
3 4ARI 1 A LEUCINE--TRNA LIGASE 562 6.1.1.4 | Details
4 3ZJT 1 A LEUCYL-TRNA SYNTHETASE 562 6.1.1.4 | Details
5 3ZJV 1 A LEUCINE--TRNA LIGASE 562 6.1.1.4 | Details
6 3ZGZ 1 A, D LEUCINE--TRNA LIGASE 562 6.1.1.4 | Details
7 4AQ7 1 A, D LEUCINE--TRNA LIGASE 562 6.1.1.4 | Details
8 3ZJU 1 A LEUCYL-TRNA SYNTHETASE 562 6.1.1.4 | Details
9 4CQN 1 A, D LEUCINE--TRNA LIGASE 562 6.1.1.4 | Details
10 5OMW 1 A, D Leucine--tRNA ligase 562 6.1.1.4 | Details
11 5ONH 1 A, D Leucine--tRNA ligase 562 6.1.1.4 | Details
12 5ON2 1 A, D Leucine--tRNA ligase 562 6.1.1.4 | Details
13 5ON3 1 A, D Leucine--tRNA ligase 562 6.1.1.4 | Details