Sequence Similarity Clusters for the Entities in PDB 4CQN

Entity #1 | Chains: A,D
LEUCINE--TRNA LIGASE protein, length: 880 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 10 3869
95 % 9 13 3080 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 2.4
PDBFlex
90 % 9 13 3125
70 % 9 13 3092
50 % 9 13 3038
40 % 9 13 2987
30 % 9 13 2799
Entity #2 | Chains: B,E
ESCHERICHIA COLI TRNA-LEU UAA ISOACCEPTOR rna, length: 82 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures