Sequence Similarity Clusters for the Entities in PDB 4CEJ

Entity #1 | Chains: A
ATP-DEPENDENT HELICASE/NUCLEASE SUBUNIT A protein, length: 1232 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 5 14683
95 % 2 5 13877 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 1.1
PDBFlex
90 % 2 5 13651
70 % 2 5 12825
50 % 2 5 11440
40 % 2 5 10381
30 % 2 5 9058
Entity #2 | Chains: B
ATP-DEPENDENT HELICASE/DEOXYRIBONUCLEASE SUBUNIT B protein, length: 1166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 5 14688
95 % 2 5 13881 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.7
PDBFlex
90 % 2 5 13655
70 % 2 5 12829
50 % 2 5 11443
40 % 2 5 10385
30 % 2 5 9062
Entity #3 | Chains: X
DNA dna, length: 70 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures