Sequence Similarity Clusters for the Entities in PDB 4CEJ

Entity #1 | Chains: A
ATP-DEPENDENT HELICASE/NUCLEASE SUBUNIT A protein, length: 1232 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 5 13890
95 % 2 5 13160 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.3
PDBFlex
90 % 2 5 12947
70 % 2 5 12152
50 % 2 5 10866
40 % 2 5 9871
30 % 2 5 8604
Entity #2 | Chains: B
ATP-DEPENDENT HELICASE/DEOXYRIBONUCLEASE SUBUNIT B protein, length: 1166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 5 13894
95 % 2 5 13164 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.7
PDBFlex
90 % 2 5 12951
70 % 2 5 12155
50 % 2 5 10868
40 % 2 5 9873
30 % 2 5 8606
Entity #3 | Chains: X
DNA dna, length: 70 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.