Sequence Similarity Clusters for the Entities in PDB 4CEI

Entity #1 | Chains: A
ATP-DEPENDENT HELICASE/NUCLEASE SUBUNIT A protein, length: 1232 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 5 14909
95 % 1 5 14078
90 % 1 5 13846
70 % 1 5 12994
50 % 1 5 11589
40 % 1 5 10506
30 % 1 5 9169
Entity #2 | Chains: B
ATP-DEPENDENT HELICASE/DEOXYRIBONUCLEASE SUBUNIT B protein, length: 1166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 14914
95 % 1 5 14082 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.7
PDBFlex
90 % 1 5 13850
70 % 1 5 12998
50 % 1 5 11592
40 % 1 5 10510
30 % 1 5 9173
Entity #3 | Chains: X
DNA dna, length: 65 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures