Sequence Similarity Clusters for the Entities in PDB 4CEI

Entity #1 | Chains: A
ATP-DEPENDENT HELICASE/NUCLEASE SUBUNIT A protein, length: 1232 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 5 14655
95 % 1 5 13852
90 % 1 5 13626
70 % 1 5 12807
50 % 1 5 11424
40 % 1 5 10368
30 % 1 5 9048
Entity #2 | Chains: B
ATP-DEPENDENT HELICASE/DEOXYRIBONUCLEASE SUBUNIT B protein, length: 1166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 14660
95 % 1 5 13856 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.7
PDBFlex
90 % 1 5 13630
70 % 1 5 12811
50 % 1 5 11427
40 % 1 5 10372
30 % 1 5 9052
Entity #3 | Chains: X
DNA dna, length: 65 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures