Sequence Similarity Clusters for the Entities in PDB 4CEI

Entity #1 | Chains: A
ATP-DEPENDENT HELICASE/NUCLEASE SUBUNIT A protein, length: 1232 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 5 14357
95 % 1 5 13597
90 % 1 5 13376
70 % 1 5 12570
50 % 1 5 11215
40 % 1 5 10184
30 % 1 5 8889
Entity #2 | Chains: B
ATP-DEPENDENT HELICASE/DEOXYRIBONUCLEASE SUBUNIT B protein, length: 1166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 14361
95 % 1 5 13600 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.7
PDBFlex
90 % 1 5 13379
70 % 1 5 12573
50 % 1 5 11217
40 % 1 5 10187
30 % 1 5 8892
Entity #3 | Chains: X
DNA dna, length: 65 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.