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The structural basis of FtsY recruitment and GTPase activation by SRP RNA
Sequence Clustering and Redundancy Reduction Results
4C7O
Cluster # 7569 Members. Sequence cutoff: 90% Cluster size: 5 sequences
Rank   PDB id Entity id Chains Description Details Taxonomy EC Number
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1 2QY9 1 A Cell division protein ftsY NG domain residues 196-497 562  
2 1FTS 1 A FTSY NG-DOMAIN RESIDUES 197 - 497 562  
3 4C7O 2 B, D SIGNAL RECOGNITION PARTICLE RECEPTOR FTSY NG DOMAIN, RESIDUES 224-497 83333  
4 2XXA 2 B, D SRP RECEPTOR FTSY RESIDUES 196-497 562  
5 3ZN8 2 D SIGNAL RECOGNITION PARTICLE RECEPTOR FTSY NG, RESIDUES 201-495 562   3.6.5.4   
 
Sequence Clusters for the Sequence Entities in PDB 4C7O
Entity #1: Chains: A,C - SIGNAL RECOGNITION PARTICLE PROTEIN protein, length: 298 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 27093
95% 1 1 21450
90% 1 1 20803
70% 1 1 18989
50% 1 1 16515
40% 17 20 1401
30% 33 41 633
Entity #2: Chains: B,D - SIGNAL RECOGNITION PARTICLE RECEPTOR FTSY protein, length: 278 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 5 7402
95% 3 5 7645
90% 3 5 7569
70% 3 5 7264
50% 12 15 1825
40% 15 19 1443
30% 34 41 633
Entity #3: Chains: E - SRP RNA rna, length: 48 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.