Sequence Similarity Clusters for the Entities in PDB 4C7O

Entity #1 | Chains: A,C
SIGNAL RECOGNITION PARTICLE PROTEIN protein, length: 298 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 35882
95 % 1 1 28109 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 1 1 27149
70 % 1 1 24599
50 % 2 2 13457
40 % 18 21 1723
30 % 42 51 649
Entity #2 | Chains: B,D
SIGNAL RECOGNITION PARTICLE RECEPTOR FTSY protein, length: 278 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 6 8369
95 % 3 6 8683 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.2
PDBFlex
90 % 3 6 8618
70 % 3 6 8278
50 % 12 16 2319
40 % 21 26 1305
30 % 43 51 649
Entity #3 | Chains: E
SRP RNA rna, length: 48 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2QY9 1 A Cell division protein ftsY NG domain residues 196-497 562
2 1FTS 1 A FTSY NG-DOMAIN RESIDUES 197 - 497 562
3 4C7O 2 B, D SIGNAL RECOGNITION PARTICLE RECEPTOR FTSY NG DOMAIN, RESIDUES 224-497 562
4 2XXA 2 B, D SRP RECEPTOR FTSY RESIDUES 196-497 562
5 5NCO 40 l Signal recognition particle receptor FtsY 562
6 3ZN8 2 D SIGNAL RECOGNITION PARTICLE RECEPTOR FTSY NG, RESIDUES 201-495 562 3.6.5.4 | Details