Sequence Similarity Clusters for the Entities in PDB 4C7O

Entity #1 | Chains: A,C
SIGNAL RECOGNITION PARTICLE PROTEIN protein, length: 298 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 36829
95 % 1 1 28859 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 1 1 27855
70 % 1 1 25140
50 % 2 2 13805
40 % 18 21 1769
30 % 42 51 661
Entity #2 | Chains: B,D
SIGNAL RECOGNITION PARTICLE RECEPTOR FTSY protein, length: 278 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 6 8566
95 % 3 6 8901 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 1.4
PDBFlex
90 % 3 6 8827
70 % 3 6 8490
50 % 12 16 2372
40 % 21 26 1331
30 % 43 51 661
Entity #3 | Chains: E
SRP RNA rna, length: 48 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1VMA 1 A, B cell division protein FtsY 2336
2 5L3S 2 B, D, F, H Signal recognition particle receptor FtsY 2285 4.2.1.99 | Details
3 3B9Q 1 A Chloroplast SRP receptor homolog, alpha subunit CPFTSY residues 65-366 3702
4 4AK9 1 A, B CPFTSY RESIDUES 80-383 3218
5 2QY9 1 A Cell division protein ftsY NG domain residues 196-497 562
6 1OKK 2 D CELL DIVISION PROTEIN FTSY NG DOMAIN, RESIDUES 2-304 271
7 2J7P 2 D, E CELL DIVISION PROTEIN FTSY NG, RESIDUES 21-303 271
8 1ZU4 1 A ftsY NG domain 2102
9 1RJ9 1 A Signal Recognition Protein 271
10 3E70 1 C Signal recognition particle receptor 2261
11 2IYL 1 D CELL DIVISION PROTEIN FTSY NGD20, RESIDUES 20-303 271
12 3DMD 1 A, B, C Signal recognition particle receptor 2261
13 2Q9C 1 A, B Cell division protein ftsY 271
14 3DM9 1 B Signal recognition particle receptor 2261
15 5L3W 1 A Signal recognition particle receptor FtsY NG domain, UNP residues 69-368 2285 4.2.1.99 | Details
16 1FTS 1 A FTSY NG-DOMAIN RESIDUES 197 - 497 562
17 2CNW 2 D, E, F CELL DIVISION PROTEIN FTSY GDP, ALF4, GMP RESIDUES 20-303 271
18 2Q9B 1 A, B Cell division protein ftsY 271
19 5L3R 2 B, D Cell division protein FtsY homolog, chloroplastic 3702
20 2Q9A 1 A, B Cell division protein ftsY 271
21 4C7O 2 B, D SIGNAL RECOGNITION PARTICLE RECEPTOR FTSY NG DOMAIN, RESIDUES 224-497 562
22 1ZU5 1 A, B ftsY NG domain 2102
23 2XXA 2 B, D SRP RECEPTOR FTSY RESIDUES 196-497 562
24 5NCO 40 l Signal recognition particle receptor FtsY 562
25 3ZN8 2 D SIGNAL RECOGNITION PARTICLE RECEPTOR FTSY NG, RESIDUES 201-495 562 3.6.5.4 | Details
26 2XKV 4 D CELL DIVISION PROTEIN FTSY 562