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The structural basis of FtsY recruitment and GTPase activation by SRP RNA
Sequence Clustering and Redundancy Reduction Results
4C7O
Cluster # 1499 Members. Sequence cutoff: 40% Cluster size: 19 sequences
Rank   PDB id Entity id Chains Description Details Taxonomy EC Number
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1 1VMA 1 A, B cell division protein FtsY 2336  
2 3B9Q 1 A Chloroplast SRP receptor homolog, alpha subunit CPFTSY residues 65-366 3702  
3 4AK9 1 A, B CPFTSY RESIDUES 80-383 3218  
4 2QY9 1 A Cell division protein ftsY NG domain residues 196-497 562  
5 1OKK 2 D CELL DIVISION PROTEIN FTSY NG DOMAIN, RESIDUES 2-304 271  
6 2J7P 2 D, E CELL DIVISION PROTEIN FTSY NG, RESIDUES 21-303 271  
7 1ZU4 1 A ftsY NG domain 2102  
8 1RJ9 1 A Signal Recognition Protein 271  
9 2IYL 1 D CELL DIVISION PROTEIN FTSY NGD20, RESIDUES 20-303 271  
10 2Q9C 1 A, B Cell division protein ftsY 271  
11 1FTS 1 A FTSY NG-DOMAIN RESIDUES 197 - 497 562  
12 2CNW 2 D, E, F CELL DIVISION PROTEIN FTSY GDP, ALF4, GMP RESIDUES 20-303 271  
13 2Q9B 1 A, B Cell division protein ftsY 271  
14 2Q9A 1 A, B Cell division protein ftsY 271  
15 4C7O 2 B, D SIGNAL RECOGNITION PARTICLE RECEPTOR FTSY NG DOMAIN, RESIDUES 224-497 83333  
16 1ZU5 1 A, B ftsY NG domain 2102  
17 2XXA 2 B, D SRP RECEPTOR FTSY RESIDUES 196-497 562  
18 3ZN8 2 D SIGNAL RECOGNITION PARTICLE RECEPTOR FTSY NG, RESIDUES 201-495 562   3.6.5.4   
19 2XKV 4 D CELL DIVISION PROTEIN FTSY 562  
 
Sequence Clusters for the Sequence Entities in PDB 4C7O
Entity #1: Chains: A,C - SIGNAL RECOGNITION PARTICLE PROTEIN protein, length: 298 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 27603
95% 1 1 21840
90% 1 1 21175
70% 1 1 19336
50% 1 1 16803
40% 17 20 1456
30% 33 41 672
Entity #2: Chains: B,D - SIGNAL RECOGNITION PARTICLE RECEPTOR FTSY protein, length: 278 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 5 7543
95% 3 5 7786
90% 3 5 7709
70% 3 5 7394
50% 12 15 1881
40% 15 19 1499
30% 34 41 672
Entity #3: Chains: E - SRP RNA rna, length: 48 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.