Sequence Similarity Clusters for the Entities in PDB 4C7O

Entity #1 | Chains: A,C
SIGNAL RECOGNITION PARTICLE PROTEIN protein, length: 298 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 32924
95 % 1 1 25810
90 % 1 1 24950
70 % 1 1 22659
50 % 2 2 12456
40 % 18 21 1590
30 % 42 50 590
Entity #2 | Chains: B,D
SIGNAL RECOGNITION PARTICLE RECEPTOR FTSY protein, length: 278 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 5 9124
95 % 3 5 9213
90 % 3 5 9120
70 % 3 5 8689
50 % 12 15 2216
40 % 21 25 1219
30 % 43 50 590
Entity #3 | Chains: E
SRP RNA rna, length: 48 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1LS1 1 A SIGNAL RECOGNITION PARTICLE PROTEIN NG domain 271
2 2J45 1 A, B SIGNAL RECOGNITION PARTICLE PROTEIN G DOMAIN, RESIDUES 1-296 271
3 2J46 1 A, B SIGNAL RECOGNITION PARTICLE PROTEIN G DOMAIN, RESIDUES 1-296 271
4 2C04 1 A, B SIGNAL RECOGNITION PARTICLE PROTEIN NG, RESIDUES 1-296 271
5 2C03 1 A, B SIGNAL RECOGNITION PARTICLE PROTEIN NG, RESIDUES 1-296 271
6 1JPN 1 A, B SIGNAL RECOGNITION PARTICLE PROTEIN NG domain 271
7 1OKK 1 A SIGNAL RECOGNITION PARTICLE PROTEIN NG DOMAIN, RESIDUES 0-293 271
8 2J7P 1 A, B SIGNAL RECOGNITION PARTICLE PROTEIN NG, RESIDUES 1-293 271
9 1NG1 1 A SIGNAL SEQUENCE RECOGNITION PROTEIN FFH NG GTPASE FRAGMENT 271
10 1FFH 1 A FFH THE NG FRAGMENT WAS GENERATED BY PROTEOLYSIS 'NG' GTPASE FRAGMENT OF FFH 271
11 2NG1 1 A SIGNAL SEQUENCE RECOGNITION PROTEIN FFH NG GTPASE FRAGMENT 271
12 1RJ9 2 B Signal recognition particle protein NG domain (Residues 1-300) 271
13 1O87 1 A, B SIGNAL RECOGNITION PARTICLE PROTEIN NG GTPASE DOMAIN, RESIDUES 1-296 271
14 3NG1 1 A, B SIGNAL SEQUENCE RECOGNITION PROTEIN FFH NG GTPASE FRAGMENT 271
15 1JPJ 1 A SIGNAL RECOGNITION PARTICLE PROTEIN NG domain 271
16 2CNW 1 A, B, C SIGNAL RECOGNITION PARTICLE PROTEIN GDP, ALF4, GMP NG DOMAIN RESIDUES 1-293 271
17 5L3R 1 A, C Signal recognition particle 54 kDa protein, chloroplastic 3702
18 4C7O 1 A, C SIGNAL RECOGNITION PARTICLE PROTEIN RESIDUES 1-296 562
19 3ZN8 1 A SIGNAL RECOGNITION PARTICLE PROTEIN NG, RESIDUES 2-295 562 3.6.5.4 | Details
20 2XKV 1 A SIGNAL RECOGNITION PARTICLE PROTEIN NG DOMAIN, RESIDUES 1-294 562 3.6.5.4 | Details
21 1RY1 12 U Signal recognition particle protein 271