Sequence Similarity Clusters for the Entities in PDB 4C7O

Entity #1 | Chains: A,C
SIGNAL RECOGNITION PARTICLE PROTEIN protein, length: 298 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 38011
95 % 1 1 29728 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 1 1 28679
70 % 1 1 25857
50 % 2 2 14228
40 % 18 21 1835
30 % 42 51 688
Entity #2 | Chains: B,D
SIGNAL RECOGNITION PARTICLE RECEPTOR FTSY protein, length: 278 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 6 8907
95 % 3 6 9195 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 1.4
PDBFlex
90 % 3 6 9117
70 % 3 6 8754
50 % 12 16 2476
40 % 21 26 1370
30 % 43 51 688
Entity #3 | Chains: E
SRP RNA rna, length: 48 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures