Sequence Similarity Clusters for the Entities in PDB 4C4W

Entity #1 | Chains: A,B,E,F
U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A protein, length: 102 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 12365
95 % 17 63 304
90 % 17 63 323
70 % 17 65 336
50 % 17 65 365
40 % 17 65 398
30 % 17 65 402
Entity #2 | Chains: C,G
50S RIBOSOMAL PROTEIN L7AE protein, length: 123 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 14013
95 % 2 4 9542
90 % 2 4 9431
70 % 2 4 8954
50 % 47 98 344
40 % 54 112 314
30 % 54 114 325
Entity #3 | Chains: D,H
TSKT-23 rna, length: 35 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.