Sequence Similarity Clusters for the Entities in PDB 4C4W

Entity #1 | Chains: A,B,E,F
U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A protein, length: 102 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 7377
95 % 17 63 389 Flexibility: Low
Max RMSD: 5.1, Avg RMSD: 0.8
PDBFlex
90 % 17 63 415
70 % 21 69 390
50 % 21 69 460
40 % 21 69 493
30 % 21 69 496
Entity #2 | Chains: C,G
50S RIBOSOMAL PROTEIN L7AE protein, length: 123 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 6 3603
95 % 2 6 3941 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 2 6 4005
70 % 2 6 3924
50 % 47 107 401
40 % 54 128 321
30 % 68 274 155
Entity #3 | Chains: D,H
TSKT-23 rna, length: 35 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures