Sequence Similarity Clusters for the Entities in PDB 4C30

Entity #1 | Chains: A,D,F,I
DNA HELICASE II protein, length: 665 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 11055
95 % 2 2 11021 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 1.9
PDBFlex
90 % 2 2 10874
70 % 2 2 10319
50 % 2 2 9347
40 % 2 2 8560
30 % 10 12 2293
Entity #2 | Chains: K,X
DNA STRAND FOR25 dna, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: L,Y
DNA STRAND REV25 dna, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.