Sequence Similarity Clusters for the Entities in PDB 4C2U

Entity #1 | Chains: A,D
DNA HELICASE II protein, length: 665 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 11065
95 % 1 2 11030 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 1.9
PDBFlex
90 % 1 2 10883
70 % 1 2 10328
50 % 1 2 9356
40 % 1 2 8570
30 % 5 12 2296
Entity #2 | Chains: X
REV25 dna, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: Y
FOR25 dna, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.