Sequence Similarity Clusters for the Entities in PDB 4C2T

Entity #1 | Chains: A,B,C,D
DNA HELICASE II protein, length: 745 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 16457
95 % 1 1 15336 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 1 1 15051
70 % 1 1 14118
50 % 1 1 12534
40 % 10 10 3201
30 % 12 12 2293
Entity #2 | Chains: M,P
DNA STRAND FOR28 dna, length: 28 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: N,O
DNA STRAND REV28 dna, length: 28 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.