Sequence Similarity Clusters for the Entities in PDB 4C2T

Entity #1 | Chains: A,B,C,D
DNA HELICASE II protein, length: 745 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 22760
95 % 1 1 20362 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 1 1 19776
70 % 1 1 18172
50 % 1 1 15776
40 % 9 9 4040
30 % 12 12 2502
Entity #2 | Chains: M,P
DNA STRAND FOR28 dna, length: 28 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: N,O
DNA STRAND REV28 dna, length: 28 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures