Sequence Similarity Clusters for the Entities in PDB 4BY9

Entity #1 | Chains: A,B
SSR26 rna, length: 72 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: C,F,I,L
NOP5/NOP56 RELATED PROTEIN protein, length: 366 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 5 4479
95 % 6 6 4797
90 % 6 6 4814
70 % 6 6 4723
50 % 6 6 4546
40 % 12 12 1864
30 % 12 12 1803
Entity #3 | Chains: D,G,J,M
50S RIBOSOMAL PROTEIN L7AE protein, length: 121 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 15 17 1648
95 % 18 20 1730
90 % 18 20 1767
70 % 25 27 1077
50 % 102 105 324
40 % 119 123 281
30 % 119 125 286
Entity #4 | Chains: E,H,K,N
FIBRILLARIN-LIKE RRNA/TRNA 2'-O-METHYLTRANSFERASE protein, length: 227 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 5 5452
95 % 7 7 4878
90 % 7 7 4895
70 % 7 7 4813
50 % 18 18 1535
40 % 19 19 1498
30 % 19 19 1474
Entity #5 | Chains: W,X,Y,Z
5'-R(*UP*CP*GP*CP*CP*CP*AP*UP*CP*AP*CP)-3' rna, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.