Sequence Similarity Clusters for the Entities in PDB 4BWM

Entity #1 | Chains: A
DNA POLYMERASE I, THERMOSTABLE protein, length: 540 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 30891
95 % 7 53 943 Flexibility: Low
Max RMSD: 3.6, Avg RMSD: 1.5
PDBFlex
90 % 7 53 976
70 % 7 53 1008
50 % 7 53 1046
40 % 7 53 1061
30 % 7 53 1041
Entity #2 | Chains: B
5'-D(*GP*AP*CP*CP*AP*CP*GP*GP*CP*GP*CP*DOCP)-3' dna, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: G
5'-R(*AP*AP*AP*GP*GP*GP*CP*GP*CP*CP*GP*UP*GP*GP*UP*C)-3' rna, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.