Sequence Similarity Clusters for the Entities in PDB 4BWJ

Entity #1 | Chains: A
DNA POLYMERASE I, THERMOSTABLE protein, length: 540 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 17793
95 % 1 55 973 Flexibility: Low
Max RMSD: 3.6, Avg RMSD: 1.5
PDBFlex
90 % 1 55 1000
70 % 1 55 1037
50 % 1 55 1081
40 % 1 55 1094
30 % 1 55 1083
Entity #2 | Chains: B
5'-D(*GP*AP*CP*CP*AP*CP*GP*GP*CP*GP*CP*DOCP)-3' dna, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: C
5'-D(*AP*GP*GP*GP*CP*GP*CP*CP*GP*TP*GP*GP*TP*CP)-3' dna, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures