Sequence Similarity Clusters for the Entities in PDB 4BQA

Entity #1 | Chains: A,D,G
PROTEIN C-ETS-2 protein, length: 142 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 29654
95 % 1 1 25880 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.6
PDBFlex
90 % 1 1 24974
70 % 7 20 1576
50 % 7 20 1623
40 % 7 20 1612
30 % 7 20 1594
Entity #2 | Chains: B,E,H
5'-D(*AP*CP*CP*GP*GP*AP*AP*GP*TP*GP)-3' dna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: C,F,I
5'-D(*CP*AP*CP*TP*TP*CP*CP*GP*GP*TP)-3' dna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures