Sequence Similarity Clusters for the Entities in PDB 4BQA

Entity #1 | Chains: A,D,G
PROTEIN C-ETS-2 protein, length: 142 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 29293
95 % 1 1 24308 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.6
PDBFlex
90 % 1 1 23501
70 % 7 20 1497
50 % 7 20 1556
40 % 7 20 1575
30 % 7 20 1549
Entity #2 | Chains: B,E,H
5'-D(*AP*CP*CP*GP*GP*AP*AP*GP*TP*GP)-3' dna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: C,F,I
5'-D(*CP*AP*CP*TP*TP*CP*CP*GP*GP*TP)-3' dna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures