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An Information Portal to 107049 Biological Macromolecular Structures

Structure of mitochondrial RNA polymerase elongation complex
Sequence Clustering and Redundancy Reduction Results
4BOC
Sequence Clusters for the Sequence Entities in PDB 4BOC
Entity #1: Chains: A - DNA-DIRECTED RNA POLYMERASE, MITOCHONDRIAL protein, length: 1088 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 38830
95% 2 2 19552
90% 2 2 18955
70% 2 2 17436
50% 2 2 15289
40% 2 2 13706
30% 2 2 11824
Entity #2: Chains: N - 5'-D(*CP*AP*TP*GP*GP*GP*GP*TP*AP*AP*TP*TP*AP*TP *TP*TP*CP*GP*AP*CP*GP*CP*CP*AP*GP*AP*CP*G)-3' dna, length: 28 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: R - 5'-R(*AP*GP*UP*CP*UP*GP*CP*GP*GP*CP*GP*CP*GP*CP)-3' rna, length: 14 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #4: Chains: T - 5'-D(*CP*GP*TP*CP*TP*GP*GP*CP*GP*TP*GP*CP*GP*CP *GP*CP*CP*GP*CP*TP*AP*CP*CP*CP*CP*AP*TP*G)-3' dna, length: 28 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.