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An Information Portal to 109093 Biological Macromolecular Structures

Structure of mitochondrial RNA polymerase elongation complex
Sequence Clustering and Redundancy Reduction Results
4BOC
Sequence Clusters for the Sequence Entities in PDB 4BOC
Entity #1: Chains: A - DNA-DIRECTED RNA POLYMERASE, MITOCHONDRIAL protein, length: 1088 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 39648
95% 2 2 19911
90% 2 2 19310
70% 2 2 17777
50% 2 2 15586
40% 2 2 13963
30% 2 2 12039
Entity #2: Chains: N - 5'-D(*CP*AP*TP*GP*GP*GP*GP*TP*AP*AP*TP*TP*AP*TP *TP*TP*CP*GP*AP*CP*GP*CP*CP*AP*GP*AP*CP*G)-3' dna, length: 28 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: R - 5'-R(*AP*GP*UP*CP*UP*GP*CP*GP*GP*CP*GP*CP*GP*CP)-3' rna, length: 14 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #4: Chains: T - 5'-D(*CP*GP*TP*CP*TP*GP*GP*CP*GP*TP*GP*CP*GP*CP *GP*CP*CP*GP*CP*TP*AP*CP*CP*CP*CP*AP*TP*G)-3' dna, length: 28 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.