Sequence Similarity Clusters for the Entities in PDB 4BHH

Entity #1 | Chains: B,D,F,Z
NUCLEOPROTEIN protein, length: 236 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 15839
95 % 2 2 14814 Flexibility: Medium
Max RMSD: 8.3, Avg RMSD: 5.5
PDBFlex
90 % 2 2 14571
70 % 2 2 13679
50 % 2 2 12151
40 % 6 11 1477
30 % 6 11 1460
Entity #2 | Chains: R
POLY-URIDINE 45-MER rna, length: 45 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures