Sequence Similarity Clusters for the Entities in PDB 4BHH

Entity #1 | Chains: B,D,F,Z
NUCLEOPROTEIN protein, length: 236 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 16135
95 % 2 2 15005 Flexibility: Medium
Max RMSD: 8.3, Avg RMSD: 5.5
PDBFlex
90 % 2 2 14698
70 % 2 2 13747
50 % 2 2 12168
40 % 6 11 1492
30 % 6 11 1481
Entity #2 | Chains: R
POLY-URIDINE 45-MER rna, length: 45 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures