Sequence Similarity Clusters for the Entities in PDB 4BGZ

Entity #1 | Chains: A,C,E
HEMAGGLUTININ protein, length: 327 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 6858
95 % 40 64 152 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 0.8
PDBFlex
90 % 44 71 151
70 % 50 85 157
50 % 85 160 80
40 % 155 298 17
30 % 158 305 26
Entity #2 | Chains: B,D,F
HAEMAGGLUTININ HA1 protein, length: 166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 12 1019
95 % 45 75 142 Flexibility: Low
Max RMSD: 6.7, Avg RMSD: 1.1
PDBFlex
90 % 50 86 137
70 % 83 161 44
50 % 155 296 11
40 % 159 306 15
30 % 159 306 27

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.