Sequence Similarity Clusters for the Entities in PDB 4BGZ

Entity #1 | Chains: A,C,E
HEMAGGLUTININ protein, length: 327 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 7069
95 % 40 64 154 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 0.9
PDBFlex
90 % 44 71 155
70 % 50 85 159
50 % 93 173 77
40 % 179 327 17
30 % 182 334 25
Entity #2 | Chains: B,D,F
HAEMAGGLUTININ HA1 protein, length: 166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 12 1062
95 % 45 75 146 Flexibility: Low
Max RMSD: 6.7, Avg RMSD: 1.1
PDBFlex
90 % 50 86 139
70 % 91 173 30
50 % 179 324 10
40 % 183 334 15
30 % 183 334 26

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.