Sequence Similarity Clusters for the Entities in PDB 4BGY

Entity #1 | Chains: A
HEMAGGLUTININ protein, length: 326 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 15 2734
95 % 30 66 159 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 0.8
PDBFlex
90 % 34 73 160
70 % 40 87 161
50 % 77 176 80
40 % 158 345 16
30 % 161 353 29
Entity #2 | Chains: B
HEMAGGLUTININ protein, length: 166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 23 42 479
95 % 35 77 149 Flexibility: Low
Max RMSD: 6.7, Avg RMSD: 1.1
PDBFlex
90 % 40 88 140
70 % 75 176 32
50 % 156 337 11
40 % 160 347 17
30 % 164 353 31

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures