Sequence Similarity Clusters for the Entities in PDB 4BGY

Entity #1 | Chains: A
HEMAGGLUTININ protein, length: 326 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 7 3585
95 % 29 64 154 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 0.9
PDBFlex
90 % 33 71 155
70 % 39 85 159
50 % 76 173 77
40 % 146 327 17
30 % 149 334 25
Entity #2 | Chains: B
HEMAGGLUTININ protein, length: 166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 17 40 249
95 % 34 75 146
90 % 39 86 139
70 % 74 173 30
50 % 146 324 10
40 % 150 334 15
30 % 150 334 26

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.