Sequence Similarity Clusters for the Entities in PDB 4BGY

Entity #1 | Chains: A
HEMAGGLUTININ protein, length: 326 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 7 3647
95 % 29 64 158 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 0.9
PDBFlex
90 % 33 71 159
70 % 39 85 164
50 % 76 174 79
40 % 148 330 17
30 % 151 337 27
Entity #2 | Chains: B
HEMAGGLUTININ protein, length: 166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 17 40 254
95 % 34 75 150
90 % 39 86 142
70 % 74 174 31
50 % 146 325 10
40 % 150 335 15
30 % 150 335 28

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures