Sequence Similarity Clusters for the Entities in PDB 4BGX

Entity #1 | Chains: A
HEMAGGLUTININ protein, length: 326 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 7 3455
95 % 12 64 152 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 0.8
PDBFlex
90 % 14 71 151
70 % 19 85 157
50 % 35 160 80
40 % 63 298 17
30 % 65 305 26
Entity #2 | Chains: B
HEMAGGLUTININ protein, length: 166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 40 237
95 % 14 75 142 Flexibility: Low
Max RMSD: 6.7, Avg RMSD: 1.1
PDBFlex
90 % 19 86 137
70 % 33 161 44
50 % 63 296 11
40 % 64 306 15
30 % 64 306 27

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.