Sequence Similarity Clusters for the Entities in PDB 4BGW

Entity #1 | Chains: A
HEMAGGLUTININ protein, length: 326 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 7 3684
95 % 20 64 158 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 0.9
PDBFlex
90 % 23 71 159
70 % 28 85 164
50 % 57 174 79
40 % 106 330 17
30 % 108 338 27
Entity #2 | Chains: B
HEMAGGLUTININ protein, length: 166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 40 255
95 % 23 75 150
90 % 28 86 142
70 % 55 174 31
50 % 104 325 10
40 % 106 335 16
30 % 106 335 28

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures