Sequence Similarity Clusters for the Entities in PDB 4BGW

Entity #1 | Chains: A
HEMAGGLUTININ protein, length: 326 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 7 3542
95 % 20 64 153 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 0.9
PDBFlex
90 % 23 71 153
70 % 28 85 157
50 % 54 167 78
40 % 101 321 16
30 % 103 328 25
Entity #2 | Chains: B
HEMAGGLUTININ protein, length: 166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 40 247
95 % 23 75 144
90 % 28 86 138
70 % 52 168 42
50 % 101 319 10
40 % 103 329 15
30 % 103 329 27

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.