Sequence Similarity Clusters for the Entities in PDB 4BGW

Entity #1 | Chains: A
HEMAGGLUTININ protein, length: 326 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 7 3606
95 % 20 64 156 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 0.9
PDBFlex
90 % 23 71 157
70 % 28 85 162
50 % 57 173 78
40 % 105 328 17
30 % 107 335 27
Entity #2 | Chains: B
HEMAGGLUTININ protein, length: 166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 40 252
95 % 23 75 148
90 % 28 86 141
70 % 55 173 30
50 % 104 324 10
40 % 106 334 16
30 % 106 334 28

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.