Sequence Similarity Clusters for the Entities in PDB 4BDU

Entity #1 | Chains: A,B,C,D
GREEN FLUORESCENT PROTEIN, APOPTOSIS REGULATOR BAX protein, length: 311 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 19731
95 % 1 1 17493 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.2
PDBFlex
90 % 1 1 17140
70 % 2 3 6808
50 % 2 3 6319
40 % 2 3 5912
30 % 2 3 5298

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures