Sequence Similarity Clusters for the Entities in PDB 4BDU

Entity #1 | Chains: A,B,C,D
GREEN FLUORESCENT PROTEIN, APOPTOSIS REGULATOR BAX protein, length: 311 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 20051
95 % 1 1 17754 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.2
PDBFlex
90 % 1 1 17390
70 % 2 3 6915
50 % 2 3 6416
40 % 2 3 6000
30 % 2 3 5381

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures