Sequence Similarity Clusters for the Entities in PDB 4BD2

Entity #1 | Chains: A
APOPTOSIS REGULATOR BAX protein, length: 174 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 6 5188
95 % 3 9 4415 Flexibility: Low
Max RMSD: 5.3, Avg RMSD: 2.9
PDBFlex
90 % 3 9 4438
70 % 3 9 4373
50 % 3 9 4206
40 % 3 9 4019
30 % 3 9 3709
Entity #2 | Chains: C
BH3-INTERACTING DOMAIN DEATH AGONIST protein, length: 34 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 24519
95 % 4 4 20936 Flexibility: Low
Max RMSD: 4.8, Avg RMSD: 2.6
PDBFlex
90 % 4 4 20348
70 % 4 5 13872
50 % 4 6 11108
40 % 4 6 10086
30 % 4 6 8797

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.