Sequence Similarity Clusters for the Entities in PDB 4BD2

Entity #1 | Chains: A
APOPTOSIS REGULATOR BAX protein, length: 174 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 6 5328
95 % 3 9 4523 Flexibility: Low
Max RMSD: 5.3, Avg RMSD: 2.9
PDBFlex
90 % 3 9 4547
70 % 3 9 4470
50 % 3 9 4294
40 % 3 9 4098
30 % 3 9 3779
Entity #2 | Chains: C
BH3-INTERACTING DOMAIN DEATH AGONIST protein, length: 34 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 4 25079
95 % 4 4 21378
90 % 4 4 20764
70 % 4 5 14170
50 % 4 6 11341
40 % 4 6 10288
30 % 4 6 8980

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures