Sequence Similarity Clusters for the Entities in PDB 4BD2

Entity #1 | Chains: A
APOPTOSIS REGULATOR BAX protein, length: 174 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 6 5093
95 % 3 9 4349 Flexibility: Low
Max RMSD: 5.3, Avg RMSD: 2.9
PDBFlex
90 % 3 9 4371
70 % 3 9 4304
50 % 3 9 4145
40 % 3 9 3958
30 % 3 9 3647
Entity #2 | Chains: C
BH3-INTERACTING DOMAIN DEATH AGONIST protein, length: 34 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 24085
95 % 4 4 20536 Flexibility: Low
Max RMSD: 4.8, Avg RMSD: 2.6
PDBFlex
90 % 4 4 19966
70 % 4 5 13611
50 % 4 6 10910
40 % 4 6 9907
30 % 4 6 8637

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.