Sequence Similarity Clusters for the Entities in PDB 4BD0

Entity #1 | Chains: A
BETA-LACTAMASE TOHO-1 protein, length: 261 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 6 12582
95 % 9 26 2189 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.3
PDBFlex
90 % 9 26 2243
70 % 24 94 293
50 % 43 328 70
40 % 47 360 52
30 % 48 367 72

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4UA6 1 A, B Beta-lactamase CTX-M-14 562 3.5.2.6 | Details
2 4UA9 1 A, B Beta-lactamase CTX-M-14 562 3.5.2.6 | Details
3 5VLE 1 A, B Beta-lactamase UNP residues 22-284 562 3.5.2.6 | Details
4 4UAA 1 A, B Beta-lactamase CTX-M-14 562 3.5.2.6 | Details
5 2P74 1 A, B Beta-lactamase CTX-M-9a 562 3.5.2.6 | Details
6 4UA7 1 A, B Beta-lactamase CTX-M-14 562 3.5.2.6 | Details
7 2ZQ7 1 A Beta-lactamase Toho-1 562 3.5.2.6 | Details
8 2ZQA 1 A Beta-lactamase Toho-1 562 3.5.2.6 | Details
9 1YLJ 1 A beta-lactamase CTX-M-9a 562 3.5.2.6 | Details
10 2ZQ8 1 A Beta-lactamase Toho-1 562 3.5.2.6 | Details
11 5A92 1 A BETA-LACTAMASE CTX-M-97 562 3.5.2.6 | Details
12 4HBU 1 A Beta-lactamase UNP residues 29-291 562 3.5.2.6 | Details
13 2ZQ9 1 A Beta-lactamase Toho-1 562 3.5.2.6 | Details
14 2ZQC 1 A Beta-lactamase Toho-1 562 3.5.2.6 | Details
15 4HBT 1 A Beta-lactamase UNP residues 29-291 562 3.5.2.6 | Details
16 1YLT 1 A beta-lactamase CTX-M-14 562 3.5.2.6 | Details
17 1YM1 1 A, B beta-lactamase CTX-M-9a 562 3.5.2.6 | Details
18 5G18 1 A BETA-LACTAMASE CTX-M-97 RESIDUES 30-291 562 3.5.2.6 | Details
19 5KMW 1 A Beta-lactamase Toho-1 562 3.5.2.6 | Details
20 4DE0 1 A, B Beta-lactamase unp residues 29-291 562 3.5.2.6 | Details
21 4PM8 1 A Beta-lactamase CTX-M-14 UNP residues 29-291 573 3.5.2.6 | Details
22 4XXR 1 A, B CTX-M-14 Class A Beta-Lactamase UNP residues 29-291 562 3.5.2.6 | Details
23 5TOP 1 A, B Beta-lactamase 562 3.5.2.6 | Details
24 4BD0 1 A BETA-LACTAMASE TOHO-1 RESIDUES 32-291 562 3.5.2.6 | Details
25 5A91 1 A null 562 3.5.2.6 | Details
26 1YLP 1 A beta-lactamase CTX-M-27 562 3.5.2.6 | Details
27 2ZQD 1 A Beta-lactamase Toho-1 562 3.5.2.6 | Details
28 3ZNY 1 A CTX-M-12A ENZYME RESIDUES 29-291 573 3.5.2.6 | Details
29 1YLY 1 A, B beta-lactamase CTX-M-9 562 3.5.2.6 | Details
30 4DE1 1 A, B Beta-lactamase unp residues 29-291 562 3.5.2.6 | Details
31 4PM5 1 A Beta-lactamase CTX-M-14 UNP residues 29-291 573 3.5.2.6 | Details
32 5TOY 1 A, B Beta-lactamase 562 3.5.2.6 | Details
33 5UJO 1 A, B Beta-lactamase UNP residues 26-288 562 3.5.2.6 | Details
34 4PM7 1 A Beta-lactamase CTX-M-14 UNP residues 29-291 573 3.5.2.6 | Details
35 1YLZ 1 A, B BETA-LACTAMASE CTX-M-14 562 3.5.2.6 | Details
36 3G32 1 A, B Beta-lactamase CTX-M-9a sequence database residues 29-291 562 3.5.2.6 | Details
37 3G34 1 A, B Beta-lactamase CTX-M-9a sequence database residues 29-291 562 3.5.2.6 | Details
38 3G2Y 1 A, B Beta-lactamase CTX-M-9a sequence database residues 29-291 562 3.5.2.6 | Details
39 4DDS 1 A, B Beta-lactamase unp residues 30-291 562 3.5.2.6 | Details
40 4DDY 1 A, B Beta-lactamase unp residues 29-291 562 3.5.2.6 | Details
41 4PMA 1 A Beta-lactamase CTX-M-14 UNP residues 29-291 573 3.5.2.6 | Details
42 4DE2 1 A, B Beta-lactamase unp residues 29-291 562 3.5.2.6 | Details
43 3G35 1 A, B Beta-lactamase CTX-M-9a sequence database residues 29-291 562 3.5.2.6 | Details
44 5U53 1 A Beta-lactamase UNP residues 24-284 562 3.5.2.6 | Details
45 4XUZ 1 A Beta-lactamase UNP residues 29-291 573 3.5.2.6 | Details
46 3HRE 1 A, B CTX-M-9 extended-spectrum beta-lactamase UNP residues 29-291 562 3.5.2.6 | Details
47 4DE3 1 A, B Beta-lactamase unp residues 29-291 562 3.5.2.6 | Details
48 4PM9 1 A Beta-lactamase CTX-M-14 UNP residues 29-291 573 3.5.2.6 | Details
49 3Q1F 1 A, B Beta-lactamase extended-spectrum beta-lactamase, UNP residues 29-291 562 3.5.2.6 | Details
50 3HVF 1 A, B CTX-M-9 extended-spectrum beta-lactamase UNP residues 29-291 562 3.5.2.6 | Details
51 3Q07 1 A, B Beta-lactamase extended-spectrum beta-lactamase, UNP residues 29-291 562 3.5.2.6 | Details
52 4X69 1 A, B Beta-lactamase Toho-1 562 3.5.2.6 | Details
53 3HUO 1 A, B CTX-M-9 extended-spectrum beta-lactamase UNP residues 29-291 562 3.5.2.6 | Details
54 5TWE 1 A Beta-lactamase UNP residues 29-291 562 3.5.2.6 | Details
55 3G2Z 1 A, B Beta-lactamase CTX-M-9a sequence database residues 29-291 562 3.5.2.6 | Details
56 4LEN 1 A, B Beta-lactamase CTX-M9 562 3.5.2.6 | Details
57 3HLW 1 A, B CTX-M-9 extended-spectrum beta-lactamase UNP residues 29-291 562 3.5.2.6 | Details
58 4PM6 1 A Beta-lactamase CTX-M-14 UNP residues 29-291 573 3.5.2.6 | Details
59 5A93 1 A BETA-LACTAMASE CTX-M-97 562 3.5.2.6 | Details
60 1YMS 1 A, B beta-lactamase CTX-M-9 562 3.5.2.6 | Details
61 4S2I 1 A, B Beta-lactamase 573 3.5.2.6 | Details
62 1YMX 1 A, B beta-lactamase CTX-M-9 562 3.5.2.6 | Details
63 5FA7 1 A, B Beta-lactamase residues 26-291 562 3.5.2.6 | Details
64 1IYS 1 A BETA-LACTAMASE TOHO-1 562 3.5.2.6 | Details
65 3G31 1 A, B Beta-lactamase CTX-M-9a sequence database residues 29-291 562 3.5.2.6 | Details
66 5TW6 1 A Beta-lactamase UNP residues 29-291 562 3.5.2.6 | Details
67 1HZO 1 A, B BETA-LACTAMASE 585 3.5.2.6 | Details
68 1WE4 1 A Beta-lactamase Toho-1 562 3.5.2.6 | Details
69 1YLW 1 A CTX-M-16 beta-lactamase 562 3.5.2.6 | Details
70 5KMU 1 A Beta-lactamase 562 3.5.2.6 | Details
71 5KMT 1 A, B Beta-lactamase 562 3.5.2.6 | Details
72 5TWD 1 A Beta-lactamase UNP residues 29-291 562 3.5.2.6 | Details
73 1IYO 1 A Toho-1 beta-lactamase 562 3.5.2.6 | Details
74 1BZA 1 A BETA-LACTAMASE 562 3.5.2.6 | Details
75 3G30 1 A Beta-lactamase CTX-M-9a sequence database residues 29-291 562 3.5.2.6 | Details
76 3BFF 1 A, B, C, D Class A beta-lactamase Sed1 SED-G238C, UNP residues 34-295 67826 3.5.2.6 | Details
77 3BYD 1 A Beta-lactamase OXY-1 571 3.5.2.6 | Details
78 2XR0 1 A TOHO-1 BETA-LACTAMASE FULLY PERDEUTERATED RESIDUES 32-291 562 3.5.2.6 | Details
79 3BFD 1 A, B, C, D Class A beta-lactamase Sed1 SED-G238C, UNP residues 33-295 67826 3.5.2.6 | Details
80 5T66 1 A, B Beta-lactamase Ser73 complexed to boronate 1C 573 3.5.2.6 | Details
81 1IYP 1 A Toho-1 beta-lactamase 562 3.5.2.6 | Details
82 3BFG 1 A, B, C, D Class A beta-lactamase Sed1 SED-G238C, UNP residues 34-295 67826 3.5.2.6 | Details
83 1IYQ 1 A Toho-1 beta-lactamase 562 3.5.2.6 | Details
84 3BFC 1 A, B, C, D Class A beta-lactamase Sed1 SED-G238C, UNP residues 34-295 67826 3.5.2.6 | Details
85 5VTH 1 A Beta-lactamase UNP residues 29-291 562 3.5.2.6 | Details
86 3BFE 1 A, B, C, D Class A beta-lactamase Sed1 SED-1, UNP residues 34-295 67826 3.5.2.6 | Details
87 5FAP 1 A, B Beta-lactamase 562 3.5.2.6 | Details
88 5FAO 1 A, B Beta-lactamase 562 3.5.2.6 | Details
89 5KSC 1 A Beta-lactamase Toho-1 Aztreonam 562 3.5.2.6 | Details
90 5A90 1 A BETA-LACTAMASE CTX-M-97 562 3.5.2.6 | Details
91 4C3Q 1 A BETA-LACTAMASE TOHO-1 PERDEUTERATED 562 3.5.2.6 | Details
92 4BD1 1 A TOHO-1 BETA-LACTAMASE PERDEUTERATED 562 3.5.2.6 | Details
93 2XQZ 1 A BETA-LACTAMSE TOHO-1 FULLY PERDEUTERATED RESIDUES 32-291 562 3.5.2.6 | Details
94 2WYX 1 A BETA-LACTAMSE TOHO-1 RESIDUES 33-288 562 3.5.2.6 | Details