Sequence Similarity Clusters for the Entities in PDB 4BD0

Entity #1 | Chains: A
BETA-LACTAMASE TOHO-1 protein, length: 261 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 9 8590
95 % 11 29 2078 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.3
PDBFlex
90 % 11 29 2129
70 % 28 104 265
50 % 47 361 62
40 % 51 393 51
30 % 52 401 68

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4UA6 1 A, B Beta-lactamase CTX-M-14 562 3.5.2.6 | Details
2 4UA9 1 A, B Beta-lactamase CTX-M-14 562 3.5.2.6 | Details
3 5VLE 1 A, B Beta-lactamase UNP residues 22-284 562 3.5.2.6 | Details
4 4UAA 1 A, B Beta-lactamase CTX-M-14 562 3.5.2.6 | Details
5 2P74 1 A, B Beta-lactamase CTX-M-9a 562 3.5.2.6 | Details
6 4UA7 1 A, B Beta-lactamase CTX-M-14 562 3.5.2.6 | Details
7 2ZQ7 1 A Beta-lactamase Toho-1 562 3.5.2.6 | Details
8 2ZQA 1 A Beta-lactamase Toho-1 562 3.5.2.6 | Details
9 1YLJ 1 A beta-lactamase CTX-M-9a 562 3.5.2.6 | Details
10 2ZQ8 1 A Beta-lactamase Toho-1 562 3.5.2.6 | Details
11 6C7A 1 A Beta-lactamase Toho-1 residues 32-291 562 3.5.2.6 | Details
12 6BT6 1 A, B Beta-lactamase 562 3.5.2.6 | Details
13 5A92 1 A BETA-LACTAMASE CTX-M-97 562 3.5.2.6 | Details
14 4HBU 1 A Beta-lactamase UNP residues 29-291 562 3.5.2.6 | Details
15 2ZQ9 1 A Beta-lactamase Toho-1 562 3.5.2.6 | Details
16 2ZQC 1 A Beta-lactamase Toho-1 562 3.5.2.6 | Details
17 4HBT 1 A Beta-lactamase UNP residues 29-291 562 3.5.2.6 | Details
18 1YLT 1 A beta-lactamase CTX-M-14 562 3.5.2.6 | Details
19 1YM1 1 A, B beta-lactamase CTX-M-9a 562 3.5.2.6 | Details
20 5G18 1 A BETA-LACTAMASE CTX-M-97 RESIDUES 30-291 562 3.5.2.6 | Details
21 5KMW 1 A Beta-lactamase Toho-1 562 3.5.2.6 | Details
22 6C79 1 A Beta-lactamase Toho-1 residues 32-291 562 3.5.2.6 | Details
23 4DE0 1 A, B Beta-lactamase unp residues 29-291 562 3.5.2.6 | Details
24 4PM8 1 A Beta-lactamase CTX-M-14 UNP residues 29-291 573 3.5.2.6 | Details
25 6BU3 1 A, B Beta-lactamase 562 3.5.2.6 | Details
26 4XXR 1 A, B CTX-M-14 Class A Beta-Lactamase UNP residues 29-291 562 3.5.2.6 | Details
27 5TOP 1 A, B Beta-lactamase 562 3.5.2.6 | Details
28 4BD0 1 A BETA-LACTAMASE TOHO-1 RESIDUES 32-291 562 3.5.2.6 | Details
29 5A91 1 A null 562 3.5.2.6 | Details
30 1YLP 1 A beta-lactamase CTX-M-27 562 3.5.2.6 | Details
31 2ZQD 1 A Beta-lactamase Toho-1 562 3.5.2.6 | Details
32 3ZNY 1 A CTX-M-12A ENZYME RESIDUES 29-291 573 3.5.2.6 | Details
33 1YLY 1 A, B beta-lactamase CTX-M-9 562 3.5.2.6 | Details
34 4DE1 1 A, B Beta-lactamase unp residues 29-291 562 3.5.2.6 | Details
35 4PM5 1 A Beta-lactamase CTX-M-14 UNP residues 29-291 573 3.5.2.6 | Details
36 5TOY 1 A, B Beta-lactamase 562 3.5.2.6 | Details
37 5UJO 1 A, B Beta-lactamase UNP residues 26-288 562 3.5.2.6 | Details
38 4PM7 1 A Beta-lactamase CTX-M-14 UNP residues 29-291 573 3.5.2.6 | Details
39 1YLZ 1 A, B BETA-LACTAMASE CTX-M-14 562 3.5.2.6 | Details
40 3G32 1 A, B Beta-lactamase CTX-M-9a sequence database residues 29-291 562 3.5.2.6 | Details
41 3G34 1 A, B Beta-lactamase CTX-M-9a sequence database residues 29-291 562 3.5.2.6 | Details
42 3G2Y 1 A, B Beta-lactamase CTX-M-9a sequence database residues 29-291 562 3.5.2.6 | Details
43 4DDS 1 A, B Beta-lactamase unp residues 30-291 562 3.5.2.6 | Details
44 4DDY 1 A, B Beta-lactamase unp residues 29-291 562 3.5.2.6 | Details
45 4PMA 1 A Beta-lactamase CTX-M-14 UNP residues 29-291 573 3.5.2.6 | Details
46 4DE2 1 A, B Beta-lactamase unp residues 29-291 562 3.5.2.6 | Details
47 3G35 1 A, B Beta-lactamase CTX-M-9a sequence database residues 29-291 562 3.5.2.6 | Details
48 5U53 1 A Beta-lactamase UNP residues 24-284 562 3.5.2.6 | Details
49 4XUZ 1 A Beta-lactamase UNP residues 29-291 573 3.5.2.6 | Details
50 3HRE 1 A, B CTX-M-9 extended-spectrum beta-lactamase UNP residues 29-291 562 3.5.2.6 | Details
51 4DE3 1 A, B Beta-lactamase unp residues 29-291 562 3.5.2.6 | Details
52 4PM9 1 A Beta-lactamase CTX-M-14 UNP residues 29-291 573 3.5.2.6 | Details
53 3Q1F 1 A, B Beta-lactamase extended-spectrum beta-lactamase, UNP residues 29-291 562 3.5.2.6 | Details
54 3HVF 1 A, B CTX-M-9 extended-spectrum beta-lactamase UNP residues 29-291 562 3.5.2.6 | Details
55 3Q07 1 A, B Beta-lactamase extended-spectrum beta-lactamase, UNP residues 29-291 562 3.5.2.6 | Details
56 4X69 1 A, B Beta-lactamase Toho-1 562 3.5.2.6 | Details
57 3HUO 1 A, B CTX-M-9 extended-spectrum beta-lactamase UNP residues 29-291 562 3.5.2.6 | Details
58 5TWE 1 A Beta-lactamase UNP residues 29-291 562 3.5.2.6 | Details
59 3G2Z 1 A, B Beta-lactamase CTX-M-9a sequence database residues 29-291 562 3.5.2.6 | Details
60 4LEN 1 A, B Beta-lactamase CTX-M9 562 3.5.2.6 | Details
61 3HLW 1 A, B CTX-M-9 extended-spectrum beta-lactamase UNP residues 29-291 562 3.5.2.6 | Details
62 4PM6 1 A Beta-lactamase CTX-M-14 UNP residues 29-291 573 3.5.2.6 | Details
63 5A93 1 A BETA-LACTAMASE CTX-M-97 562 3.5.2.6 | Details
64 1YMS 1 A, B beta-lactamase CTX-M-9 562 3.5.2.6 | Details
65 6CYN 1 A, B, C, D, E, F, G, H Beta-lactamase 562 3.5.2.6 | Details
66 4S2I 1 A, B Beta-lactamase 573 3.5.2.6 | Details
67 6CYK 1 A, B Beta-lactamase 562 3.5.2.6 | Details
68 1YMX 1 A, B beta-lactamase CTX-M-9 562 3.5.2.6 | Details
69 5FA7 1 A, B Beta-lactamase residues 26-291 562 3.5.2.6 | Details
70 1IYS 1 A BETA-LACTAMASE TOHO-1 562 3.5.2.6 | Details
71 3G31 1 A, B Beta-lactamase CTX-M-9a sequence database residues 29-291 562 3.5.2.6 | Details
72 6CYQ 1 A, B, C, D, E, F, G, H Beta-lactamase 562 3.5.2.6 | Details
73 6GTH 1 A Beta-lactamase 573 3.5.2.6 | Details
74 5TW6 1 A Beta-lactamase UNP residues 29-291 562 3.5.2.6 | Details
75 1HZO 1 A, B BETA-LACTAMASE 585 3.5.2.6 | Details
76 1WE4 1 A Beta-lactamase Toho-1 562 3.5.2.6 | Details
77 1YLW 1 A CTX-M-16 beta-lactamase 562 3.5.2.6 | Details
78 5KMU 1 A Beta-lactamase 562 3.5.2.6 | Details
79 5KMT 1 A, B Beta-lactamase 562 3.5.2.6 | Details
80 6CYU 1 A Beta-lactamase 562 3.5.2.6 | Details
81 5TWD 1 A Beta-lactamase UNP residues 29-291 562 3.5.2.6 | Details
82 1IYO 1 A Toho-1 beta-lactamase 562 3.5.2.6 | Details
83 1BZA 1 A BETA-LACTAMASE 562 3.5.2.6 | Details
84 3G30 1 A Beta-lactamase CTX-M-9a sequence database residues 29-291 562 3.5.2.6 | Details
85 3BFF 1 A, B, C, D Class A beta-lactamase Sed1 SED-G238C, UNP residues 34-295 67826 3.5.2.6 | Details
86 3BYD 1 A Beta-lactamase OXY-1 571 3.5.2.6 | Details
87 2XR0 1 A TOHO-1 BETA-LACTAMASE FULLY PERDEUTERATED RESIDUES 32-291 562 3.5.2.6 | Details
88 3BFD 1 A, B, C, D Class A beta-lactamase Sed1 SED-G238C, UNP residues 33-295 67826 3.5.2.6 | Details
89 5T66 1 A, B Beta-lactamase Ser73 complexed to boronate 1C 573 3.5.2.6 | Details
90 1IYP 1 A Toho-1 beta-lactamase 562 3.5.2.6 | Details
91 3BFG 1 A, B, C, D Class A beta-lactamase Sed1 SED-G238C, UNP residues 34-295 67826 3.5.2.6 | Details
92 1IYQ 1 A Toho-1 beta-lactamase 562 3.5.2.6 | Details
93 3BFC 1 A, B, C, D Class A beta-lactamase Sed1 SED-G238C, UNP residues 34-295 67826 3.5.2.6 | Details
94 5VTH 1 A Beta-lactamase UNP residues 29-291 562 3.5.2.6 | Details
95 3BFE 1 A, B, C, D Class A beta-lactamase Sed1 SED-1, UNP residues 34-295 67826 3.5.2.6 | Details
96 5FAP 1 A, B Beta-lactamase 562 3.5.2.6 | Details
97 5FAO 1 A, B Beta-lactamase 562 3.5.2.6 | Details
98 6C78 1 A Beta-lactamase Toho-1 RESIDUES 32-291 562 3.5.2.6 | Details
99 5KSC 1 A Beta-lactamase Toho-1 Aztreonam 562 3.5.2.6 | Details
100 5A90 1 A BETA-LACTAMASE CTX-M-97 562 3.5.2.6 | Details
101 4C3Q 1 A BETA-LACTAMASE TOHO-1 PERDEUTERATED 562 3.5.2.6 | Details
102 4BD1 1 A TOHO-1 BETA-LACTAMASE PERDEUTERATED 562 3.5.2.6 | Details
103 2XQZ 1 A BETA-LACTAMSE TOHO-1 FULLY PERDEUTERATED RESIDUES 32-291 562 3.5.2.6 | Details
104 2WYX 1 A BETA-LACTAMSE TOHO-1 RESIDUES 33-288 562 3.5.2.6 | Details