Sequence Similarity Clusters for the Entities in PDB 4BCJ

Entity #1 | Chains: A
CYCLIN-DEPENDENT KINASE 9 protein, length: 331 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 20 1814
95 % 11 21 2296 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 1.0
PDBFlex
90 % 11 21 2358
70 % 11 21 2364
50 % 11 21 2348
40 % 399 462 49
30 % 3304 3966 2
Entity #2 | Chains: B
CYCLIN-T1 protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 13 4431
95 % 11 22 2129 Flexibility: Low
Max RMSD: 3.4, Avg RMSD: 1.6
PDBFlex
90 % 11 22 2179
70 % 12 23 2007
50 % 12 23 2018
40 % 12 23 2015
30 % 15 30 1336

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures