Sequence Similarity Clusters for the Entities in PDB 4BCJ

Entity #1 | Chains: A
CYCLIN-DEPENDENT KINASE 9 protein, length: 331 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 21 2082
95 % 11 21 2384 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 1.0
PDBFlex
90 % 11 21 2452
70 % 11 21 2446
50 % 11 21 2431
40 % 402 465 54
30 % 3607 4337 2
Entity #2 | Chains: B
CYCLIN-T1 protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 13 5055
95 % 11 22 2159 Flexibility: Low
Max RMSD: 3.4, Avg RMSD: 1.6
PDBFlex
90 % 11 22 2205
70 % 12 23 2087
50 % 12 23 2103
40 % 12 23 2074
30 % 15 30 1375

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures