Sequence Similarity Clusters for the Entities in PDB 4BCJ

Entity #1 | Chains: A
CYCLIN-DEPENDENT KINASE 9 protein, length: 331 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 20 1772
95 % 11 21 2242 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 1.0
PDBFlex
90 % 11 21 2307
70 % 11 21 2307
50 % 11 21 2285
40 % 398 460 49
30 % 3261 3912 2
Entity #2 | Chains: B
CYCLIN-T1 protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 13 4347
95 % 11 22 2082 Flexibility: Low
Max RMSD: 3.4, Avg RMSD: 1.6
PDBFlex
90 % 11 22 2130
70 % 12 23 1959
50 % 12 23 1979
40 % 12 23 1974
30 % 15 29 1370

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures