Sequence Similarity Clusters for the Entities in PDB 4BCI

Entity #1 | Chains: A
CYCLIN-DEPENDENT KINASE 9 protein, length: 331 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 12 20 1849
95 % 13 21 2337 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 1.0
PDBFlex
90 % 13 21 2401
70 % 13 21 2408
50 % 13 21 2385
40 % 412 465 50
30 % 3541 4076 2
Entity #2 | Chains: B
CYCLIN-T1 protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 13 4511
95 % 13 22 2164 Flexibility: Low
Max RMSD: 3.4, Avg RMSD: 1.6
PDBFlex
90 % 13 22 2216
70 % 14 23 2042
50 % 14 23 2048
40 % 14 23 2045
30 % 18 30 1352

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures