Sequence Similarity Clusters for the Entities in PDB 4BBQ

Entity #1 | Chains: A,B
LYSINE-SPECIFIC DEMETHYLASE 2A protein, length: 117 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 47730
95 % 1 1 35673 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 1.6
PDBFlex
90 % 1 1 34056
70 % 1 1 30268
50 % 2 3 7327
40 % 2 3 6808
30 % 2 3 6070

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures