Sequence Similarity Clusters for the Entities in PDB 4BBQ

Entity #1 | Chains: A,B
LYSINE-SPECIFIC DEMETHYLASE 2A protein, length: 117 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 46146
95 % 1 1 34553 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 1.6
PDBFlex
90 % 1 1 33027
70 % 1 1 29398
50 % 2 3 7077
40 % 2 3 6580
30 % 2 3 5864

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.