Sequence Similarity Clusters for the Entities in PDB 4BAM

Entity #1 | Chains: A
THROMBIN LIGHT CHAIN protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 121 331 44
95 % 121 332 60
90 % 121 332 65
70 % 121 334 77
50 % 121 334 101
40 % 121 334 125
30 % 121 334 137
Entity #2 | Chains: B
THROMBIN HEAVY CHAIN protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 107 286 55
95 % 125 370 36
90 % 125 377 38
70 % 125 401 44
50 % 125 401 78
40 % 756 1635 4
30 % 801 1777 6
Entity #3 | Chains: D
HIRUDIN VARIANT-1 protein, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.