Sequence Similarity Clusters for the Entities in PDB 4BAM

Entity #1 | Chains: A
THROMBIN LIGHT CHAIN protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 118 323 40
95 % 118 324 58
90 % 118 324 61
70 % 118 326 69
50 % 118 326 93
40 % 118 326 117
30 % 118 326 130
Entity #2 | Chains: B
THROMBIN HEAVY CHAIN protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 104 278 51
95 % 122 362 20
90 % 122 369 23
70 % 122 393 27
50 % 122 393 57
40 % 729 1585 4
30 % 774 1727 6
Entity #3 | Chains: D
HIRUDIN VARIANT-1 protein, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.