Sequence Similarity Clusters for the Entities in PDB 4BAM

Entity #1 | Chains: A
THROMBIN LIGHT CHAIN protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 119 328 43
95 % 119 329 58
90 % 119 329 63
70 % 119 331 72
50 % 119 331 96
40 % 119 331 120
30 % 119 331 134
Entity #2 | Chains: B
THROMBIN HEAVY CHAIN protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 105 283 52
95 % 123 367 34
90 % 123 374 36
70 % 123 398 41
50 % 123 398 74
40 % 742 1611 4
30 % 787 1753 6
Entity #3 | Chains: D
HIRUDIN VARIANT-1 protein, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.