Sequence Similarity Clusters for the Entities in PDB 4B86

Entity #1 | Chains: A,B,E,F,I,J
MALE-SPECIFIC LETHAL 1 HOMOLOG protein, length: 59 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 14542
95 % 1 1 13742 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.5
PDBFlex
90 % 1 1 13523
70 % 1 1 12716
50 % 1 1 11338
40 % 1 1 10281
30 % 1 1 8962
Entity #2 | Chains: C,D,G,H,K,L
MALE-SPECIFIC LETHAL 2 HOMOLOG protein, length: 116 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 9900
95 % 2 2 9966 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.9
PDBFlex
90 % 2 2 9846
70 % 2 2 9370
50 % 2 2 8479
40 % 2 2 7774
30 % 2 2 6855

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures