Sequence Similarity Clusters for the Entities in PDB 4B86

Entity #1 | Chains: A,B,E,F,I,J
MALE-SPECIFIC LETHAL 1 HOMOLOG protein, length: 59 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 14795
95 % 1 1 13970 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.5
PDBFlex
90 % 1 1 13744
70 % 1 1 12902
50 % 1 1 11503
40 % 1 1 10420
30 % 1 1 9083
Entity #2 | Chains: C,D,G,H,K,L
MALE-SPECIFIC LETHAL 2 HOMOLOG protein, length: 116 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 10095
95 % 2 2 10135 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.9
PDBFlex
90 % 2 2 10011
70 % 2 2 9515
50 % 2 2 8607
40 % 2 2 7886
30 % 2 2 6951

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures