Sequence Similarity Clusters for the Entities in PDB 4B86

Entity #1 | Chains: A,B,E,F,I,J
MALE-SPECIFIC LETHAL 1 HOMOLOG protein, length: 59 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 14236
95 % 1 1 13478 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.5
PDBFlex
90 % 1 1 13265
70 % 1 1 12471
50 % 1 1 11124
40 % 1 1 10090
30 % 1 1 8797
Entity #2 | Chains: C,D,G,H,K,L
MALE-SPECIFIC LETHAL 2 HOMOLOG protein, length: 116 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 9690
95 % 2 2 9790 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.9
PDBFlex
90 % 2 2 9674
70 % 2 2 9211
50 % 2 2 8330
40 % 2 2 7634
30 % 2 2 6736

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.