Sequence Similarity Clusters for the Entities in PDB 4B7Y

Entity #1 | Chains: A,B
MALE-SPECIFIC LETHAL 1 HOMOLOG protein, length: 44 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 49606
95 % 1 1 37071 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 1 1 35394
70 % 1 1 31458
50 % 1 1 26909
40 % 1 1 23768
30 % 1 1 20202
Entity #2 | Chains: C,D
MALE-SPECIFIC LETHAL 2 HOMOLOG protein, length: 116 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 9807
95 % 1 2 9892 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.9
PDBFlex
90 % 1 2 9770
70 % 1 2 9296
50 % 1 2 8412
40 % 1 2 7711
30 % 1 2 6799

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures