Sequence Similarity Clusters for the Entities in PDB 4B7K

Entity #1 | Chains: A
HYPOXIA-INDUCIBLE FACTOR 1-ALPHA INHIBITOR protein, length: 349 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 27 37 1271
95 % 28 38 1478 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.5
PDBFlex
90 % 28 38 1503
70 % 28 38 1514
50 % 28 38 1567
40 % 28 38 1563
30 % 28 38 1547
Entity #2 | Chains: B
CONSENSUS ANKYRIN REPEAT DOMAIN-SER protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 42864
95 % 3 3 25359
90 % 3 3 24485
70 % 3 3 22199
50 % 3 3 19063
40 % 3 3 16844
30 % 3 3 14115

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures