Sequence Similarity Clusters for the Entities in PDB 4B7K

Entity #1 | Chains: A
HYPOXIA-INDUCIBLE FACTOR 1-ALPHA INHIBITOR protein, length: 349 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 22 31 1351
95 % 28 38 1402 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.5
PDBFlex
90 % 28 38 1428
70 % 28 38 1441
50 % 28 38 1501
40 % 28 38 1513
30 % 28 38 1483
Entity #2 | Chains: B
CONSENSUS ANKYRIN REPEAT DOMAIN-SER protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 76035
95 % 3 3 25445
90 % 3 3 24591
70 % 3 3 22344
50 % 3 3 19352
40 % 3 3 17239
30 % 3 3 14809

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures