Sequence Similarity Clusters for the Entities in PDB 4B7K

Entity #1 | Chains: A
HYPOXIA-INDUCIBLE FACTOR 1-ALPHA INHIBITOR protein, length: 349 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 27 37 1369
95 % 28 38 1585 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.5
PDBFlex
90 % 28 38 1611
70 % 28 38 1621
50 % 28 38 1659
40 % 28 38 1650
30 % 28 38 1625
Entity #2 | Chains: B
CONSENSUS ANKYRIN REPEAT DOMAIN-SER protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 44646
95 % 3 3 26477
90 % 3 3 25530
70 % 3 3 23053
50 % 3 3 19795
40 % 3 3 17468
30 % 3 3 14651

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures