Sequence Similarity Clusters for the Entities in PDB 4B7K

Entity #1 | Chains: A
HYPOXIA-INDUCIBLE FACTOR 1-ALPHA INHIBITOR protein, length: 349 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 27 37 1398
95 % 28 38 1618 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.5
PDBFlex
90 % 28 38 1644
70 % 28 38 1661
50 % 28 38 1684
40 % 28 38 1681
30 % 28 38 1649
Entity #2 | Chains: B
CONSENSUS ANKYRIN REPEAT DOMAIN-SER protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 45598
95 % 3 3 27024
90 % 3 3 26048
70 % 3 3 23511
50 % 3 3 20182
40 % 3 3 17816
30 % 3 3 14934

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures