Sequence Similarity Clusters for the Entities in PDB 4B3T

Entity #1 | Chains: A
16S RIBOSOMAL RNA rna, length: 1521 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #10 | Chains: J
30S RIBOSOMAL PROTEIN S10 protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 64 245 34
95 % 64 246 47
90 % 64 246 52
70 % 64 246 63
50 % 77 340 29
40 % 77 340 39
30 % 85 406 41
Entity #11 | Chains: K
30S RIBOSOMAL PROTEIN S11 protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 64 247 32
95 % 64 247 43
90 % 64 247 48
70 % 64 247 57
50 % 71 334 37
40 % 81 407 27
30 % 81 408 40
Entity #12 | Chains: L
30S RIBOSOMAL PROTEIN S12 protein, length: 132 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 37 200 45
95 % 64 254 35
90 % 64 254 40
70 % 71 345 23
50 % 71 346 28
40 % 71 346 38
30 % 71 346 57
Entity #13 | Chains: M
30S RIBOSOMAL PROTEIN S13 protein, length: 126 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 64 248 30
95 % 64 248 41
90 % 64 248 46
70 % 64 248 55
50 % 71 339 34
40 % 71 339 46
30 % 79 407 44
Entity #14 | Chains: N
30S RIBOSOMAL PROTEIN S14 TYPE Z protein, length: 60 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 64 246 33
95 % 64 246 48
90 % 64 246 53
70 % 64 247 60
50 % 64 247 85
40 % 64 247 107
30 % 64 247 119
Entity #15 | Chains: O
30S RIBOSOMAL PROTEIN S15 protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 64 250 27
95 % 66 255 33
90 % 66 255 38
70 % 66 255 48
50 % 76 347 27
40 % 76 348 37
30 % 76 348 56
Entity #16 | Chains: P
30S RIBOSOMAL PROTEIN S16 protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 64 242 35
95 % 64 247 45
90 % 64 247 50
70 % 64 247 59
50 % 64 247 84
40 % 64 248 105
30 % 71 337 63
Entity #17 | Chains: Q
30S RIBOSOMAL PROTEIN S17 protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 84 229
95 % 64 241 49
90 % 64 245 54
70 % 64 245 64
50 % 64 245 87
40 % 64 245 109
30 % 64 245 121
Entity #18 | Chains: R
30S RIBOSOMAL PROTEIN S18 protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 49 585
95 % 58 212 63
90 % 58 212 66
70 % 58 212 77
50 % 58 212 108
40 % 58 212 129
30 % 58 212 142
Entity #19 | Chains: S
30S RIBOSOMAL PROTEIN S19 protein, length: 92 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 65 250 26
95 % 65 250 37
90 % 65 250 43
70 % 65 250 52
50 % 72 337 33
40 % 72 337 44
30 % 72 337 59
Entity #2 | Chains: B
30S RIBOSOMAL PROTEIN S2 protein, length: 256 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 64 247 28
95 % 64 248 38
90 % 64 248 44
70 % 64 248 53
50 % 71 333 36
40 % 71 334 47
30 % 71 334 61
Entity #20 | Chains: T
30S RIBOSOMAL PROTEIN S20 protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 50 380
95 % 64 246 46
90 % 64 246 51
70 % 64 246 62
50 % 64 246 86
40 % 64 246 108
30 % 64 246 120
Entity #21 | Chains: V
30S RIBOSOMAL PROTEIN THX protein, length: 26 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 64 237 39
95 % 64 237 55
90 % 64 237 59
70 % 64 237 69
50 % 64 237 93
40 % 64 237 115
30 % 64 237 130
Entity #22 | Chains: W
5'-R(*UP*UP*CP*AP*AP*AP)-3' rna, length: 6 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #23 | Chains: Z
5'-R(*GP*GP*GP*AP*UP*UP*GP*AP*AP*AP*AP*UP*CP*CP*CP)-3' rna, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: C
30S RIBOSOMAL PROTEIN S3 protein, length: 239 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 58 211 43
95 % 58 211 64
90 % 58 211 67
70 % 58 211 78
50 % 60 261 80
40 % 60 261 98
30 % 60 261 116
Entity #4 | Chains: D
30S RIBOSOMAL PROTEIN S4 protein, length: 208 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 64 240 36
95 % 64 248 39
90 % 64 248 45
70 % 64 248 54
50 % 71 334 35
40 % 71 335 45
30 % 71 335 60
Entity #5 | Chains: E
30S RIBOSOMAL PROTEIN S5 protein, length: 161 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 64 247 31
95 % 64 247 42
90 % 64 247 47
70 % 64 247 56
50 % 72 338 32
40 % 72 338 43
30 % 72 340 58
Entity #6 | Chains: F
30S RIBOSOMAL PROTEIN S6 protein, length: 101 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 65 252 24
95 % 71 258 32
90 % 71 258 36
70 % 71 258 47
50 % 71 258 82
40 % 71 258 101
30 % 78 297 79
Entity #7 | Chains: G
30S RIBOSOMAL PROTEIN S7 protein, length: 155 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 65 251 25
95 % 65 252 36
90 % 65 252 41
70 % 65 252 50
50 % 71 297 49
40 % 71 298 62
30 % 71 298 86
Entity #8 | Chains: H
30S RIBOSOMAL PROTEIN S8 protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 65 247 29
95 % 65 247 40
90 % 65 251 42
70 % 65 251 51
50 % 74 340 31
40 % 75 342 40
30 % 84 411 39
Entity #9 | Chains: I
30S RIBOSOMAL PROTEIN S9 protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 90 194
95 % 64 247 44
90 % 64 247 49
70 % 64 247 58
50 % 71 334 38
40 % 71 334 48
30 % 79 402 45

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.