Sequence Similarity Clusters for the Entities in PDB 4B3T

Entity #1 | Chains: A
16S RIBOSOMAL RNA rna, length: 1521 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #10 | Chains: J
30S RIBOSOMAL PROTEIN S10 protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 64 248 35
95 % 64 249 48
90 % 64 249 53
70 % 64 249 63
50 % 77 344 28
40 % 77 344 38
30 % 85 414 38
Entity #11 | Chains: K
30S RIBOSOMAL PROTEIN S11 protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 64 250 33
95 % 64 250 44
90 % 64 250 49
70 % 64 250 58
50 % 71 338 37
40 % 81 415 23
30 % 81 416 37
Entity #12 | Chains: L
30S RIBOSOMAL PROTEIN S12 protein, length: 132 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 37 202 46
95 % 64 257 35
90 % 64 257 40
70 % 71 349 23
50 % 71 350 27
40 % 71 350 37
30 % 71 350 56
Entity #13 | Chains: M
30S RIBOSOMAL PROTEIN S13 protein, length: 126 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 64 251 31
95 % 64 251 42
90 % 64 251 47
70 % 64 251 56
50 % 71 343 34
40 % 71 343 46
30 % 79 415 44
Entity #14 | Chains: N
30S RIBOSOMAL PROTEIN S14 TYPE Z protein, length: 60 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 64 249 34
95 % 64 249 49
90 % 64 249 54
70 % 64 250 61
50 % 64 250 86
40 % 64 250 106
30 % 64 250 120
Entity #15 | Chains: O
30S RIBOSOMAL PROTEIN S15 protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 64 253 28
95 % 66 258 34
90 % 66 258 39
70 % 66 258 49
50 % 76 351 26
40 % 76 352 36
30 % 76 352 55
Entity #16 | Chains: P
30S RIBOSOMAL PROTEIN S16 protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 64 245 36
95 % 64 250 46
90 % 64 250 51
70 % 64 250 60
50 % 64 250 85
40 % 64 251 105
30 % 71 341 62
Entity #17 | Chains: Q
30S RIBOSOMAL PROTEIN S17 protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 87 221
95 % 64 244 50
90 % 64 248 55
70 % 64 248 64
50 % 64 248 89
40 % 64 248 110
30 % 64 248 122
Entity #18 | Chains: R
30S RIBOSOMAL PROTEIN S18 protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 51 579
95 % 58 215 63
90 % 58 215 66
70 % 58 215 78
50 % 58 215 109
40 % 58 215 129
30 % 58 215 142
Entity #19 | Chains: S
30S RIBOSOMAL PROTEIN S19 protein, length: 92 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 65 253 27
95 % 65 253 37
90 % 65 253 43
70 % 65 253 52
50 % 72 341 33
40 % 72 341 44
30 % 72 341 59
Entity #2 | Chains: B
30S RIBOSOMAL PROTEIN S2 protein, length: 256 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 64 250 29
95 % 64 251 39
90 % 64 251 45
70 % 64 251 54
50 % 71 337 36
40 % 71 338 47
30 % 71 338 61
Entity #20 | Chains: T
30S RIBOSOMAL PROTEIN S20 protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 51 366
95 % 64 249 47
90 % 64 249 52
70 % 64 249 62
50 % 64 249 88
40 % 64 249 108
30 % 64 249 121
Entity #21 | Chains: V
30S RIBOSOMAL PROTEIN THX protein, length: 26 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 64 240 40
95 % 64 240 56
90 % 64 240 60
70 % 64 240 69
50 % 64 240 93
40 % 64 240 116
30 % 64 240 130
Entity #22 | Chains: W
5'-R(*UP*UP*CP*AP*AP*AP)-3' rna, length: 6 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #23 | Chains: Z
5'-R(*GP*GP*GP*AP*UP*UP*GP*AP*AP*AP*AP*UP*CP*CP*CP)-3' rna, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: C
30S RIBOSOMAL PROTEIN S3 protein, length: 239 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 58 214 43
95 % 58 214 64
90 % 58 214 67
70 % 58 214 79
50 % 60 265 78
40 % 60 265 99
30 % 60 265 113
Entity #4 | Chains: D
30S RIBOSOMAL PROTEIN S4 protein, length: 208 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 64 243 37
95 % 64 251 40
90 % 64 251 46
70 % 64 251 55
50 % 71 338 35
40 % 71 339 45
30 % 71 339 60
Entity #5 | Chains: E
30S RIBOSOMAL PROTEIN S5 protein, length: 161 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 64 250 32
95 % 64 250 43
90 % 64 250 48
70 % 64 250 57
50 % 72 342 32
40 % 72 342 43
30 % 72 344 58
Entity #6 | Chains: F
30S RIBOSOMAL PROTEIN S6 protein, length: 101 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 65 255 25
95 % 71 261 33
90 % 71 261 37
70 % 71 261 48
50 % 71 261 84
40 % 71 261 102
30 % 78 300 79
Entity #7 | Chains: G
30S RIBOSOMAL PROTEIN S7 protein, length: 155 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 65 254 26
95 % 65 255 36
90 % 65 255 41
70 % 65 255 50
50 % 71 300 51
40 % 71 301 64
30 % 71 301 89
Entity #8 | Chains: H
30S RIBOSOMAL PROTEIN S8 protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 65 250 30
95 % 65 250 41
90 % 65 254 42
70 % 65 254 51
50 % 74 344 30
40 % 75 346 40
30 % 84 419 35
Entity #9 | Chains: I
30S RIBOSOMAL PROTEIN S9 protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 91 192
95 % 64 250 45
90 % 64 250 50
70 % 64 250 59
50 % 71 338 38
40 % 71 338 48
30 % 79 410 45

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.