Sequence Similarity Clusters for the Entities in PDB 4B3Q

Entity #1 | Chains: A
REVERSE TRANSCRIPTASE/RIBONUCLEASE H protein, length: 560 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 51665
95 % 252 252 92 Flexibility: Medium
Max RMSD: 23.3, Avg RMSD: 3.9
PDBFlex
90 % 252 252 97
70 % 252 252 114
50 % 253 253 152
40 % 254 254 165
30 % 254 254 179
Entity #2 | Chains: B
P51 RT protein, length: 454 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 7 10253
95 % 246 246 116
90 % 246 246 120
70 % 246 246 136
50 % 248 248 159
40 % 248 248 176
30 % 248 248 187
Entity #3 | Chains: D
PRIMER DNA dna, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #4 | Chains: R
TEMPLATE RNA rna, length: 34 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures