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An Information Portal to 108263 Biological Macromolecular Structures

Structures of HIV-1 RT and RNA-DNA Complex Reveal a Unique RT Conformation and Substrate Interface
Sequence Clustering and Redundancy Reduction Results
4B3Q
Sequence Clusters for the Sequence Entities in PDB 4B3Q
Entity #1: Chains: A - REVERSE TRANSCRIPTASE/RIBONUCLEASE H protein, length: 560 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 40299
95% 203 203 79
90% 203 203 83
70% 203 203 99
50% 204 204 134
40% 204 204 152
30% 204 204 169
Entity #2: Chains: B - P51 RT protein, length: 454 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 3 19850
95% 197 197 84
90% 197 197 89
70% 197 197 104
50% 198 198 136
40% 198 198 159
30% 198 198 179
Entity #3: Chains: D - PRIMER DNA dna, length: 25 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #4: Chains: R - TEMPLATE RNA rna, length: 34 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.