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An Information Portal to 105097 Biological Macromolecular Structures

Structures of HIV-1 RT and RNA-DNA Complex Reveal a Unique RT Conformation and Substrate Interface
Sequence Clustering and Redundancy Reduction Results
4B3Q
Sequence Clusters for the Sequence Entities in PDB 4B3Q
Entity #1: Chains: A - REVERSE TRANSCRIPTASE/RIBONUCLEASE H protein, length: 560 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 39012
95% 202 202 62
90% 202 202 65
70% 202 202 81
50% 203 203 118
40% 203 203 140
30% 203 203 162
Entity #2: Chains: B - P51 RT protein, length: 454 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 3 19258
95% 196 196 69
90% 196 196 73
70% 196 196 90
50% 197 197 120
40% 197 197 146
30% 197 197 173
Entity #3: Chains: D - PRIMER DNA dna, length: 25 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #4: Chains: R - TEMPLATE RNA rna, length: 34 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.