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An Information Portal to 111558 Biological Macromolecular Structures

Structures of HIV-1 RT and RNA-DNA Complex Reveal a Unique RT Conformation and Substrate Interface
Sequence Clustering and Redundancy Reduction Results
4B3Q
Sequence Clusters for the Sequence Entities in PDB 4B3Q
Entity #1: Chains: A - REVERSE TRANSCRIPTASE/RIBONUCLEASE H protein, length: 560 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 41603
95% 210 210 78
90% 210 210 82
70% 210 210 104
50% 211 211 142
40% 211 211 155
30% 211 211 171
Entity #2: Chains: B - P51 RT protein, length: 454 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 3 20557
95% 204 204 87
90% 204 204 92
70% 204 204 113
50% 205 205 148
40% 205 205 162
30% 205 205 181
Entity #3: Chains: D - PRIMER DNA dna, length: 25 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #4: Chains: R - TEMPLATE RNA rna, length: 34 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.