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An Information Portal to 110071 Biological Macromolecular Structures

Structures of HIV-1 RT and RNA-DNA Complex Reveal a Unique RT Conformation and Substrate Interface
Sequence Clustering and Redundancy Reduction Results
4B3Q
Sequence Clusters for the Sequence Entities in PDB 4B3Q
Entity #1: Chains: A - REVERSE TRANSCRIPTASE/RIBONUCLEASE H protein, length: 560 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 40952
95% 208 208 80
90% 208 208 83
70% 208 208 101
50% 209 209 139
40% 209 209 154
30% 209 209 171
Entity #2: Chains: B - P51 RT protein, length: 454 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 3 20183
95% 202 202 87
90% 202 202 92
70% 202 202 112
50% 203 203 146
40% 203 203 163
30% 203 203 182
Entity #3: Chains: D - PRIMER DNA dna, length: 25 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #4: Chains: R - TEMPLATE RNA rna, length: 34 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.