Sequence Similarity Clusters for the Entities in PDB 4B3P

Entity #1 | Chains: A
REVERSE TRANSCRIPTASE/RIBONUCLEASE H protein, length: 560 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 50944
95 % 247 248 89
90 % 247 248 94
70 % 247 248 113
50 % 248 249 149
40 % 248 249 164
30 % 248 249 180
Entity #2 | Chains: B
P51 RT protein, length: 454 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 25494
95 % 241 242 113 Flexibility: Low
Max RMSD: 4.8, Avg RMSD: 1.5
PDBFlex
90 % 241 242 117
70 % 241 242 133
50 % 242 243 156
40 % 242 243 175
30 % 242 243 188
Entity #3 | Chains: D
DNA dna, length: 29 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #4 | Chains: R
RNA rna, length: 34 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.