Sequence Similarity Clusters for the Entities in PDB 4B3P

Entity #1 | Chains: A
REVERSE TRANSCRIPTASE/RIBONUCLEASE H protein, length: 560 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 52032
95 % 254 255 92
90 % 254 255 96
70 % 254 255 113
50 % 255 256 151
40 % 256 257 164
30 % 256 257 176
Entity #2 | Chains: B
P51 RT protein, length: 454 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 7 10343
95 % 248 249 116 Flexibility: Low
Max RMSD: 4.8, Avg RMSD: 1.5
PDBFlex
90 % 248 249 120
70 % 248 249 135
50 % 250 251 160
40 % 250 251 175
30 % 250 251 187
Entity #3 | Chains: D
DNA dna, length: 29 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #4 | Chains: R
RNA rna, length: 34 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures