Sequence Similarity Clusters for the Entities in PDB 4B3J

Entity #1 | Chains: A,B
FATTY ACID BETA-OXIDATION COMPLEX ALPHA-CHAIN FADB protein, length: 736 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 12665
95 % 2 3 12090 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.8
PDBFlex
90 % 2 3 11911
70 % 2 3 11249
50 % 2 3 10079
40 % 2 3 9126
30 % 2 16 1871
Entity #2 | Chains: C,D
FATTY ACID BETA-OXIDATION COMPLEX BETA-CHAIN FADA protein, length: 403 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 12666
95 % 2 3 12091 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 2 4 8946
70 % 2 4 8591
50 % 2 4 7848
40 % 71 89 180
30 % 71 89 200

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures