Sequence Similarity Clusters for the Entities in PDB 4B3J

Entity #1 | Chains: A,B
FATTY ACID BETA-OXIDATION COMPLEX ALPHA-CHAIN FADB protein, length: 736 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 10591
95 % 2 3 10557 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.8
PDBFlex
90 % 2 3 10417
70 % 2 3 9879
50 % 2 3 8973
40 % 2 3 8218
30 % 2 16 1732
Entity #2 | Chains: C,D
FATTY ACID BETA-OXIDATION COMPLEX BETA-CHAIN FADA protein, length: 403 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 11181
95 % 2 3 11014 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 2 4 8104
70 % 2 4 7788
50 % 2 4 7139
40 % 66 84 160
30 % 66 84 180

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.