Sequence Similarity Clusters for the Entities in PDB 4B3J

Entity #1 | Chains: A,B
FATTY ACID BETA-OXIDATION COMPLEX ALPHA-CHAIN FADB protein, length: 736 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 11279
95 % 2 3 11232 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.8
PDBFlex
90 % 2 3 11085
70 % 2 3 10516
50 % 2 3 9523
40 % 2 3 8719
30 % 2 16 1844
Entity #2 | Chains: C,D
FATTY ACID BETA-OXIDATION COMPLEX BETA-CHAIN FADA protein, length: 403 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 11913
95 % 2 3 11711 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 2 4 8607
70 % 2 4 8280
50 % 2 4 7578
40 % 71 89 171
30 % 71 89 182

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures