Sequence Similarity Clusters for the Entities in PDB 4B2D

Entity #1 | Chains: A,B,C
PYRUVATE KINASE ISOZYMES M1/M2 protein, length: 548 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 13 782
95 % 11 39 217 Flexibility: Low
Max RMSD: 4.5, Avg RMSD: 1.5
PDBFlex
90 % 11 39 226
70 % 13 45 190
50 % 21 70 157
40 % 23 85 141
30 % 23 85 147
Entity #2 | Chains: D
PYRUVATE KINASE ISOZYMES M1/M2 protein, length: 548 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 52090
95 % 12 39 217 Flexibility: Low
Max RMSD: 4.5, Avg RMSD: 1.5
PDBFlex
90 % 12 39 226
70 % 14 45 190
50 % 22 70 157
40 % 24 85 141
30 % 24 85 147

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures