Sequence Similarity Clusters for the Entities in PDB 4B2D

Entity #1 | Chains: A,B,C
PYRUVATE KINASE ISOZYMES M1/M2 protein, length: 548 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 13 768
95 % 10 37 223 Flexibility: Low
Max RMSD: 4.5, Avg RMSD: 1.5
PDBFlex
90 % 10 37 231
70 % 12 43 191
50 % 20 68 152
40 % 22 83 142
30 % 22 83 148
Entity #2 | Chains: D
PYRUVATE KINASE ISOZYMES M1/M2 protein, length: 548 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 51298
95 % 11 37 223 Flexibility: Low
Max RMSD: 4.5, Avg RMSD: 1.5
PDBFlex
90 % 11 37 231
70 % 13 43 191
50 % 21 68 152
40 % 23 83 142
30 % 23 83 148

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.