Sequence Similarity Clusters for the Entities in PDB 4B2D

Entity #1 | Chains: A,B,C
PYRUVATE KINASE ISOZYMES M1/M2 protein, length: 548 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 11 1270
95 % 11 39 224 Flexibility: Low
Max RMSD: 4.5, Avg RMSD: 1.5
PDBFlex
90 % 11 39 232
70 % 13 45 198
50 % 21 70 167
40 % 23 85 146
30 % 23 85 161
Entity #2 | Chains: D
PYRUVATE KINASE ISOZYMES M1/M2 protein, length: 548 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 11 1270
95 % 12 39 224 Flexibility: Low
Max RMSD: 4.5, Avg RMSD: 1.5
PDBFlex
90 % 12 39 232
70 % 14 45 198
50 % 22 70 167
40 % 24 85 146
30 % 24 85 161

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures