Sequence Similarity Clusters for the Entities in PDB 4B23

Entity #1 | Chains: A
MAG2, DNA-3-METHYLADENINE GLYCOSYLASE 2 protein, length: 232 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 5 15856
95 % 3 5 14832
90 % 3 5 14591
70 % 3 5 13694
50 % 3 5 12163
40 % 3 5 11008
30 % 3 5 9575
Entity #2 | Chains: X
5'-D(*GP*CP*TP*AP*CP*(3DR)P*AP*AP*TP*CP*GP)-3' dna, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: Y
5'-D(*CP*GP*AP*TP*TP*GP*GP*TP*AP*GP*CP)-3' dna, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures