Sequence Similarity Clusters for the Entities in PDB 4B23

Entity #1 | Chains: A
MAG2, DNA-3-METHYLADENINE GLYCOSYLASE 2 protein, length: 232 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 5 15574
95 % 3 5 14592
90 % 3 5 14359
70 % 3 5 13489
50 % 3 5 11988
40 % 3 5 10862
30 % 3 5 9447
Entity #2 | Chains: X
5'-D(*GP*CP*TP*AP*CP*(3DR)P*AP*AP*TP*CP*GP)-3' dna, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: Y
5'-D(*CP*GP*AP*TP*TP*GP*GP*TP*AP*GP*CP)-3' dna, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures