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Unprecedented shculpting of DNA at abasic sites by DNA glycosylase homolog Mag2
Sequence Clustering and Redundancy Reduction Results
4B23
Sequence Clusters for the Sequence Entities in PDB 4B23
Entity #1: Chains: A - MAG2, DNA-3-METHYLADENINE GLYCOSYLASE 2 protein, length: 232 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 5 11745
95% 3 5 11203
90% 3 5 11036
70% 3 5 10441
50% 3 5 9382
40% 3 5 8552
30% 3 5 7492
Entity #2: Chains: X - 5'-D(*GP*CP*TP*AP*CP*(3DR)P*AP*AP*TP*CP*GP)-3' dna, length: 11 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: Y - 5'-D(*CP*GP*AP*TP*TP*GP*GP*TP*AP*GP*CP)-3' dna, length: 11 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.