Sequence Similarity Clusters for the Entities in PDB 4AYR

Entity #1 | Chains: A
MANNOSYL-OLIGOSACCHARIDE 1,2-ALPHA-MANNOSIDASE protein, length: 447 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 6 12573
95 % 4 6 12073 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 4 6 11900
70 % 4 6 11261
50 % 4 6 10078
40 % 4 6 9109
30 % 4 21 1948

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4AYO 1 A MANNOSYL-OLIGOSACCHARIDE 1,2-ALPHA-MANNOSIDASE 366602 3.2.1.113 | Details
2 4AYP 1 A MANNOSYL-OLIGOSACCHARIDE 1,2-ALPHA-MANNOSIDASE 366602 3.2.1.113 | Details
3 5MEH 1 A Mannosyl-oligosaccharide 1,2-alpha-mannosidase 366602 3.2.1.113 | Details
4 4AYR 1 A MANNOSYL-OLIGOSACCHARIDE 1,2-ALPHA-MANNOSIDASE 366602 3.2.1.113 | Details
5 4AYQ 1 A MANNOSYL-OLIGOSACCHARIDE 1,2-ALPHA-MANNOSIDASE 366602 3.2.1.113 | Details
6 5NE5 1 A Mannosyl-oligosaccharide 1,2-alpha-mannosidase 366602 3.2.1.113 | Details