Sequence Similarity Clusters for the Entities in PDB 4AYP

Entity #1 | Chains: A
MANNOSYL-OLIGOSACCHARIDE 1,2-ALPHA-MANNOSIDASE protein, length: 447 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 6 11921
95 % 2 6 11734 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 2 6 11578
70 % 2 6 10956
50 % 2 6 9888
40 % 2 6 9030
30 % 2 6 7940

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures