Sequence Similarity Clusters for the Entities in PDB 4AYM

Entity #1 | Chains: A,B,E,F
COMPLEMENT FACTOR H protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 6 2468
95 % 6 6 3103
90 % 6 6 3148
70 % 6 6 3120
50 % 7 7 2927
40 % 8 8 2601
30 % 8 8 2435
Entity #2 | Chains: C,D
FACTOR H BINDING PROTEIN protein, length: 270 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 35175
95 % 2 2 20999
90 % 2 2 20419
70 % 12 14 2063
50 % 12 14 2054
40 % 12 14 2055
30 % 12 14 1972

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.