Sequence Similarity Clusters for the Entities in PDB 4AYI

Entity #1 | Chains: A,E
COMPLEMENT FACTOR H protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 6 2252
95 % 1 6 2863
90 % 1 6 2907
70 % 1 6 2900
50 % 2 7 2723
40 % 3 8 2428
30 % 3 8 2272
Entity #2 | Chains: D
LIPOPROTEIN GNA1870 CCOMPND 7 protein, length: 270 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 50367
95 % 1 2 19650
90 % 1 2 19108
70 % 6 13 1958
50 % 6 13 1977
40 % 6 13 1986
30 % 6 13 1899

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.