Sequence Similarity Clusters for the Entities in PDB 4AYI

Entity #1 | Chains: A,E
COMPLEMENT FACTOR H protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 6 2324
95 % 1 6 2939
90 % 1 6 2982
70 % 1 6 2974
50 % 2 7 2803
40 % 3 8 2487
30 % 3 8 2325
Entity #2 | Chains: D
LIPOPROTEIN GNA1870 CCOMPND 7 protein, length: 270 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 51515
95 % 1 2 20103
90 % 1 2 19535
70 % 6 13 2016
50 % 6 13 2029
40 % 6 13 2032
30 % 6 13 1945

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.